HHsearch alignment for GI: 254780267 and conserved domain: PRK09859

Probab=97.79  E-value=0.00012  Score=48.60  Aligned_cols=72  Identities=17%  Similarity=0.277  Sum_probs=55.2

Q ss_pred             CCCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEEEECC-------------------------------------
Q ss_conf             6626870462567740367641000124420104348999737-------------------------------------
Q gi|254780267|r   88 NYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAM-------------------------------------  130 (171)
Q Consensus        88 ~~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~iiEAM-------------------------------------  130 (171)
T Consensus        60 ~~~~l~~~VsG~v-------~~~~v~~Gd~VkkGq~La~LD~~~~~~~l~~A~A~l~~A~a~~~~A~~~~~R~~~L~~~~  132 (385)
T PRK09859         60 EVAEIRPQVGGII-------IKRNFIEGDKVNQGDSLYQIDPAPLQAELNSAKGSLAKALSTASNARITFNRQASLLKTN  132 (385)
T ss_pred             EEEEEEEECCEEE-------EEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             8999981456299-------999838999884898899828479999999999999999999999998999999887658


Q ss_pred             ----------------------------------CEEEEEECCCCCEEEEEECCCCCCCCCCC--EEEEEEE
Q ss_conf             ----------------------------------72689998998199999848986836997--2999953
Q gi|254780267|r  131 ----------------------------------KTMNHIVAPCSGKVQDINVKDGQSVEYGD--ALLVLEK  166 (171)
Q Consensus       131 ----------------------------------Km~n~I~a~~~G~I~~i~v~~G~~V~~gq--~L~~i~~  166 (171)
T Consensus       133 ~iS~~~~d~a~~~~~~A~A~~~~A~a~l~~a~~~l~~t~i~APf~GvV~~~~v~~G~~V~~~~~~~l~~v~~  204 (385)
T PRK09859        133 YVSRQDYDTARTQLNEAEANVTVAKAAVEQATINLQYANVTSPITGVSGKSSVTVGALVTANQADSLVTVQR  204 (385)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCCEECCCCCCEEEEEEC
T ss_conf             623547998999999999999999999987553212269987778704103547787764788631699971