HHsearch alignment for GI: 254780267 and conserved domain: TIGR01108
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit; InterPro: IPR005776 This family describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea . The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.; GO: 0008948 oxaloacetate decarboxylase activity, 0006814 sodium ion transport.
Probab=99.83 E-value=1.4e-20 Score=145.34 Aligned_cols=71 Identities=37% Similarity=0.540 Sum_probs=65.0
Q ss_pred CCCCCCCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCEE
Q ss_conf 345466268704625677403676410001244201043489997377268999899819999984898683699729
Q gi|254780267|r 84 LSPDNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDAL 161 (171)
Q Consensus 84 ~~~~~~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~iiEAMKm~n~I~a~~~G~I~~i~v~~G~~V~~gq~L 161 (171)
T Consensus 546 a~~~a~~~vTaP~aG~i~-------~~~V~~G~~V~~G~vlL~~EAMKME~Ei~A~~aG~V~~i~v~~Gd~V~~gqVL 616 (616)
T TIGR01108 546 AKAGAITDVTAPIAGSIV-------KITVSEGDEVKEGEVLLVVEAMKMETEIKAAAAGIVEEILVKKGDKVSPGQVL 616 (616)
T ss_pred CCCCCCCCCCCCCCCCEE-------EEEECCCCEECCCCEEEEEECCCCCHHHCCCCCCCEEEEEECCCCEECCCCCC
T ss_conf 888989875667777369-------99835787431577588531001112200543570112344578750886679