HHsearch alignment for GI: 254780267 and conserved domain: TIGR01108
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit; InterPro: IPR005776 This family describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea . The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.; GO: 0008948 oxaloacetate decarboxylase activity, 0006814 sodium ion transport.
Probab=96.49 E-value=0.0022 Score=41.01 Aligned_cols=36 Identities=33% Similarity=0.657 Sum_probs=32.3
Q ss_pred CEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEE
Q ss_conf 726899989981999998489868369972999953
Q gi|254780267|r 131 KTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVLEK 166 (171)
Q Consensus 131 Km~n~I~a~~~G~I~~i~v~~G~~V~~gq~L~~i~~ 166 (171)
T Consensus 549 ~a~~~vTaP~aG~i~~~~V~~G~~V~~G~vlL~~EA 584 (616)
T TIGR01108 549 GAITDVTAPIAGSIVKITVSEGDEVKEGEVLLVVEA 584 (616)
T ss_pred CCCCCCCCCCCCCEEEEEECCCCEECCCCEEEEEEC
T ss_conf 989875667777369998357874315775885310