HHsearch alignment for GI: 254780267 and conserved domain: TIGR01235
>TIGR01235 pyruv_carbox pyruvate carboxylase; InterPro: IPR005930 In the postabsorptive state, blood glucose concentration is kept constant by a combination of glycogenolysis and gluconeogenesis. During prolonged fasting, when hepatic glycogen is exhausted, gluconeogenesis becomes the only source of plasma glucose. Gluconeogenesis (the production of new glucose molecules) occurs mainly in liver and, to a small extent, in kidneys. Pyruvate carboxylase (6.4.1.1 from EC), a member of the biotin-dependent enzyme family, catalyses the ATP-dependent carboxylation of pyruvate to oxaloacetate, thus playing a crucial role in gluconeogenesis. ATP + pyruvate + HCO3- = ADP + phosphate + oxaloacetate Most well characterised forms of active enzyme consist of four identical subunits arranged in a tetrahedron-like structure. Each subunit contains three functional domains: the biotin carboxylation domain, the transcarboxylation domain and the biotin carboxyl carrier domain.; GO: 0004736 pyruvate carboxylase activity, 0006094 gluconeogenesis, 0005737 cytoplasm.
Probab=99.81 E-value=6.2e-20 Score=141.47 Aligned_cols=78 Identities=36% Similarity=0.503 Sum_probs=71.0
Q ss_pred CCCCCCCCCCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCE
Q ss_conf 43334546626870462567740367641000124420104348999737726899989981999998489868369972
Q gi|254780267|r 81 IPLLSPDNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDA 160 (171)
Q Consensus 81 ~~~~~~~~~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~iiEAMKm~n~I~a~~~G~I~~i~v~~G~~V~~gq~ 160 (171)
T Consensus 1092 ~~KA~~~n~~hvGApMpG~v-------~~v~v~~G~~v~kGd~l~~~~AMKME~~v~ap~~G~vk~v~v~~G~~i~~~DL 1164 (1169)
T TIGR01235 1092 RRKADKGNPAHVGAPMPGVV-------IEVKVEAGQKVNKGDPLVVLEAMKMETVVQAPKDGTVKEVLVKDGEKIDAKDL 1164 (1169)
T ss_pred ECCCCCCCHHHCCCCCCCCE-------EEEEEECCCEECCCCEEEEEECCCCCCEEECCCCCEEEEEEECCCCCCCCCCE
T ss_conf 14778887432256899707-------99994138730167848996037632046678997246888358870351211
Q ss_pred EEEEE
Q ss_conf 99995
Q gi|254780267|r 161 LLVLE 165 (171)
Q Consensus 161 L~~i~ 165 (171)
T Consensus 1165 L~~le 1169 (1169)
T TIGR01235 1165 LLVLE 1169 (1169)
T ss_pred EEEEC
T ss_conf 35409