HHsearch alignment for GI: 254780267 and conserved domain: TIGR01347
>TIGR01347 sucB 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; InterPro: IPR006255 These sequences describe the TCA cycle 2-oxoglutarate system E2 component, dihydrolipoamide succinyltransferase. It is closely related to the pyruvate dehydrogenase E2 component, dihydrolipoamide acetyltransferase. Members include the mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus and are generally excluded from this group of sequences as are all examples of dihydrolipoamide acetyltransferase. ; GO: 0004149 dihydrolipoyllysine-residue succinyltransferase activity, 0006099 tricarboxylic acid cycle, 0045252 oxoglutarate dehydrogenase complex.
Probab=98.95 E-value=6.5e-10 Score=80.62 Aligned_cols=55 Identities=31% Similarity=0.473 Sum_probs=53.7
Q ss_pred ECCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEE
Q ss_conf 0124420104348999737726899989981999998489868369972999953
Q gi|254780267|r 112 VNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVLEK 166 (171)
Q Consensus 112 V~vGd~Vk~G~~l~iiEAMKm~n~I~a~~~G~I~~i~v~~G~~V~~gq~L~~i~~ 166 (171)
T Consensus 22 KkvGD~V~~DE~iveiETDKV~lEV~Sp~dGvl~~~~~~eG~TV~~g~~La~~~E 76 (435)
T TIGR01347 22 KKVGDTVKRDELIVEIETDKVVLEVPSPADGVLQEILEKEGDTVTSGQVLAVLEE 76 (435)
T ss_pred CCCCCEEECCCEEEEEECCCEEEEEECCCCCHHHHHHCCCCCEECCCEEEEEEEC
T ss_conf 6888711227768975207446788288530217430689888505507788823