HHsearch alignment for GI: 254780267 and conserved domain: TIGR01348

>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; InterPro: IPR006256 This group of sequences are a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and percent identity (UPGMA) trees. Members contain two or three copies of the lipoyl-binding domain. Escherichia coli AceF is included in this set while mitochondrial and some other bacterial forms are excluded. dihydrolipoyllysine-residue acetyltransferase E2 component of pyruvate dehydrogenase complex; GO: 0004742 dihydrolipoyllysine-residue acetyltransferase activity, 0006096 glycolysis, 0045254 pyruvate dehydrogenase complex.
Probab=99.13  E-value=5.6e-10  Score=81.00  Aligned_cols=83  Identities=31%  Similarity=0.453  Sum_probs=69.5

Q ss_pred             CCCCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEE
Q ss_conf             46626870462567740367641000124420104348999737726899989981999998489868369972999953
Q gi|254780267|r   87 DNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVLEK  166 (171)
Q Consensus        87 ~~~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~iiEAMKm~n~I~a~~~G~I~~i~v~~G~~V~~gq~L~~i~~  166 (171)
T Consensus       204 sg~~~v~vPDiGdn~~-~~~V~evlV~vGDtV~~~QslItLE~DKA~~EvPa~asGvv~~v~v~vGD~v~~G~~il~L~~  282 (655)
T TIGR01348       204 SGVQEVKVPDIGDNIE-KVEVIEVLVKVGDTVSADQSLITLESDKASMEVPAPASGVVKSVKVKVGDSVSTGDLILVLSV  282 (655)
T ss_pred             CCCEEEECCCCCCCCC-CEEEEEEEECCCCEECCCCCEEEEECCEEEEEECCCCCCEEEEEEEEECCEECCCCEEEEEEE
T ss_conf             5741544265377777-502799995437776478867887067147874689852378999865667057888999710


Q ss_pred             CCCC
Q ss_conf             4788
Q gi|254780267|r  167 TGDN  170 (171)
Q Consensus       167 ~~~~  170 (171)
T Consensus       283 ~~st  286 (655)
T TIGR01348       283 AGST  286 (655)
T ss_pred             CCCC
T ss_conf             5677