HHsearch alignment for GI: 254780267 and conserved domain: cd06849
>cd06849 lipoyl_domain Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid dehydrogenase (BCDH), contain at least three different enzymes, 2-oxo acid dehydrogenase (E1), dihydrolipoyl acyltransferase (E2) and dihydrolipoamide dehydrogenase (E3) and play a key role in redox regulation. E2, the central component of the complex, catalyzes the transfer of the acyl group of CoA from E1 to E3 via reductive acetylation of a lipoyl group covalently attached to a lysine residue.
Probab=94.10 E-value=0.057 Score=32.38 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=27.4
Q ss_pred CCCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEEE
Q ss_conf 6626870462567740367641000124420104348999
Q gi|254780267|r 88 NYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLII 127 (171)
Q Consensus 88 ~~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~ii 127 (171)
T Consensus 42 ~~~~i~a~~~G~v~-------~i~~~~G~~v~~G~~l~~i 74 (74)
T cd06849 42 ATVEVEAPAAGVLA-------KILVEEGDTVPVGQVIAVI 74 (74)
T ss_pred EEEEEECCCCEEEE-------EEEECCCCEECCCCEEEEC
T ss_conf 07841079899999-------9987899998899999979