HHsearch results for GI: 254780267 and protein with PDBid: 1bdo_A
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hammerhead structure, selenomethionine, ligase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.95 E-value=3.8e-28 Score=190.01 Aligned_cols=78 Identities=49% Similarity=0.705 Sum_probs=76.0
Q ss_pred CCCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEE
Q ss_conf 662687046256774036764100012442010434899973772689998998199999848986836997299995
Q gi|254780267|r 88 NYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVLE 165 (171)
Q Consensus 88 ~~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~iiEAMKm~n~I~a~~~G~I~~i~v~~G~~V~~gq~L~~i~ 165 (171)
.++.|+|||+|+|||+|+|+.++||++||+|++||+||+||||||+++|.||++|+|.+|+|++|+.|++||+||+||
T Consensus 3 sg~~V~aPm~G~~~~~~~p~~~~~V~~Gd~V~~g~~l~~iEamK~~~~i~a~~~G~V~~i~v~~G~~V~~G~~L~~ie 80 (80)
T 1bdo_A 3 SGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp CSEEEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred CCCEEECCCCEEEEECCCCCCCCEECCCCEEECCCEEEEEEECCCHHHCCCCCCEEEEEEEECCCCEECCCCEEEEEC
T ss_conf 899985898779981469999853268999966878999997620120659999899899868979989999999979