HHsearch results for GI: 254780267 and protein with PDBid: 1hpc_A
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=97.11 E-value=0.00052 Score=43.44 Aligned_cols=56 Identities=23% Similarity=0.418 Sum_probs=44.5
Q ss_pred CCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEECC---CCCCC---CCCC-EEEEEEECC
Q ss_conf 12442010434899973772689998998199999848---98683---6997-299995347
Q gi|254780267|r 113 NKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVK---DGQSV---EYGD-ALLVLEKTG 168 (171)
Q Consensus 113 ~vGd~Vk~G~~l~iiEAMKm~n~I~a~~~G~I~~i~v~---~G~~V---~~gq-~L~~i~~~~ 168 (171)
.+|++|++|+.+|.||+-|.-.+|.||++|+|.+++-+ +=+.+ -||. =||+|+++.
T Consensus 45 ~~g~~v~~g~~~~~iEs~k~~~~i~sPvsG~vv~vN~~l~~~P~llN~dpy~~gWl~~i~~~d 107 (131)
T 1hpc_A 45 EPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIKPTS 107 (131)
T ss_dssp CTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEECTHHHHCTTHHHHCTTTTTCCEEEEESS
T ss_pred CCCCEEECCCEEEEEEECCCEEEEEECCCEEEEEECHHHHHCHHHHHCCCCCCCEEEEEEECC
T ss_conf 998775279728999984510013302434999851544419687608988896799999899