HHsearch alignment for GI: 254780268 and conserved domain: CHL00194
>CHL00194 ycf39 Ycf39; Provisional.
Probab=93.08 E-value=0.84 Score=26.06 Aligned_cols=169 Identities=17% Similarity=0.150 Sum_probs=93.7
Q ss_pred EEEE-ECCCHHHHHHHHHHHHCCCEEEEECCCHHHCCCCHHHCCEEEECCCCCCCCHHCCHHHHHHHHHHCCCCEEEC-C
Q ss_conf 6866-4470999999998888096599985855771877675857999189985300069899999998709989945-8
Q gi|254780268|r 4 KILI-ANRGEIALRILRACKELGIPTVAVHSTADSGAMHVRLADESVCIGPPSSKDSYLNIQQIVAACEVTGADAIHP-G 81 (443)
Q Consensus 4 ~iLi-anrGeia~riira~~elGi~tv~v~s~~D~~a~~~~~ADe~~~i~~~~~~~sYldi~~ii~~a~~~~~daihP-G 81 (443)
T Consensus 2 ~ILV~GATG~lGr~vVr~Ll~~G~~Vr~lvRnp~ka~~l~~~Gve~v~-g------Dl~dpesl~~Al--~GvdaVi~~~ 72 (319)
T CHL00194 2 SLLVIGATGTLGRQIVRRALDEGYQVKCLVRNLRKAAFLKEWGAELVY-G------DLSLPETIPPAL--EGITAIIDAS 72 (319)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEE-E------CCCCHHHHHHHH--CCCCEEEEEC
T ss_conf 799989985899999999996889089995786763234215967999-4------278877899996--5996799945
Q ss_pred CCHHH-----CC------HHHHHHHHHCCCE-EE-----CCCH-HHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf 53131-----09------7666889845921-62-----6898-999872189988776642244332433345579998
Q gi|254780268|r 82 YGFLS-----EN------AKFAEILEDHHIK-FI-----GPSS-EHIKIMGDKITAKKTAQQLGIPVVPGSGEVYPHTAM 143 (443)
Q Consensus 82 yGfLs-----En------~~fa~~~e~~Gi~-fI-----GPs~-~ai~~~gDK~~~k~~a~~~GVP~~p~~~~~~~~ea~ 143 (443)
T Consensus 73 ~~~~~~~~~~~~vd~~g~~~li~AAk~aGVkr~V~lS~lga~~~~~~p~~~~K~~~E~~L~~Sgl~~---TIlRPs~F~q 149 (319)
T CHL00194 73 TSRPSDLNNAYQIDLEGKLALIEAAKAAKVKRFIFFSILNAEQYPQVPLMKIKSDIEEKLKQSGINY---TIFRLAGFFQ 149 (319)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE---EEECCHHHHH
T ss_conf 6677886208898898899999999984998899961356666887567787999999998679985---9984739999
Q ss_pred HHHHCCCCHHHHH-CCCCCCCCE-EEEEEECHHHHHHHHHHHHH
Q ss_conf 7320033012200-023457821-68887506689999987543
Q gi|254780268|r 144 PIAKEIGFPVLVK-ASAGGGGRG-MRIAYSENDLSEAIDQARSE 185 (443)
Q Consensus 144 ~~a~~iGyPviiK-p~~gGGG~G-i~vv~~~~el~~a~~~a~~e 185 (443)
T Consensus 150 ~l~~~~a~pi~~~~~v~~~~~~~~ia~I-~~~DVA~~~a~aL~~ 192 (319)
T CHL00194 150 GLISQYAIPILDSQTIWITGESTPIAYI-DTQDAAKFALKSLSL 192 (319)
T ss_pred HHHHHHHHHHHCCCCEEECCCCCCCCCC-CHHHHHHHHHHHHCC
T ss_conf 8899876776307857766998752887-799999999999589