HHsearch alignment for GI: 254780268 and conserved domain: COG1038
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion].
Probab=100.00 E-value=0 Score=1113.05 Aligned_cols=440 Identities=50% Similarity=0.845 Sum_probs=426.6
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHCCCCHHHCCEEEECCCCC-CCCHHCCHHHHHHHHHHCCCCEEE
Q ss_conf 9706866447099999999888809659998585577187767585799918998-530006989999999870998994
Q gi|254780268|r 1 MISKILIANRGEIALRILRACKELGIPTVAVHSTADSGAMHVRLADESVCIGPPS-SKDSYLNIQQIVAACEVTGADAIH 79 (443)
Q Consensus 1 m~~~iLianrGeia~riira~~elGi~tv~v~s~~D~~a~~~~~ADe~~~i~~~~-~~~sYldi~~ii~~a~~~~~daih 79 (443)
T Consensus 6 ~~~KvLVANRgEIAIRvFRAa~ELgi~TVAIys~ED~~S~HR~KADEsY~iG~~~~Pi~aYL~IdeII~iAk~~gaDaIh 85 (1149)
T COG1038 6 KIKKVLVANRGEIAIRVFRAANELGIKTVAIYSEEDRLSLHRFKADESYLIGEGKGPVEAYLSIDEIIRIAKRSGADAIH 85 (1149)
T ss_pred HHHEEEEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHCCCCCEEECCCCCCCHHHHCCHHHHHHHHHHCCCCEEC
T ss_conf 10202550453366999998886086489985144543044303551066067887268743299999999970887313
Q ss_pred CCCCHHHCCHHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCC--CHHHHHHHHHCCCCHHHHHC
Q ss_conf 5853131097666889845921626898999872189988776642244332433345--57999873200330122000
Q gi|254780268|r 80 PGYGFLSENAKFAEILEDHHIKFIGPSSEHIKIMGDKITAKKTAQQLGIPVVPGSGEV--YPHTAMPIAKEIGFPVLVKA 157 (443)
Q Consensus 80 PGyGfLsEn~~fa~~~e~~Gi~fIGPs~~ai~~~gDK~~~k~~a~~~GVP~~p~~~~~--~~~ea~~~a~~iGyPviiKp 157 (443)
T Consensus 86 PGYGfLSEn~efA~~c~eaGI~FIGP~~e~ld~~GdKv~Ar~~A~~agvPvipgt~~~~~~~ee~~~fa~~~gyPvmiKA 165 (1149)
T COG1038 86 PGYGFLSENPEFARACAEAGITFIGPKPEVLDMLGDKVKARNAAIKAGVPVIPGTDGPIETIEEALEFAEEYGYPVMIKA 165 (1149)
T ss_pred CCCCCCCCCHHHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 78432447989999999759789688879998844288899999975998556999982129999999986698589997
Q ss_pred CCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 23457821688875066899999875432125899816884434201103315777347870236566542113562255
Q gi|254780268|r 158 SAGGGGRGMRIAYSENDLSEAIDQARSEALAAFGNDAVYIEKYLENPRHIEVQIFGDGMGNAIHFGERDCSVQRRNQKIW 237 (443)
Q Consensus 158 ~~gGGG~Gi~vv~~~~el~~a~~~a~~ea~~~fgd~~vlvEk~i~~~rhiEvqVl~D~~g~~v~l~erdCSiQrr~qkii 237 (443)
T Consensus 166 ~~GGGGRGMR~vr~~~~l~~~~~~AksEAkaAFG~~eVyvEk~ve~pkHIEVQiLgD~~GnvvHLfERDCSvQRRhQKVV 245 (1149)
T COG1038 166 AAGGGGRGMRVVRSEADLAEAFERAKSEAKAAFGNDEVYVEKLVENPKHIEVQILGDTHGNVVHLFERDCSVQRRHQKVV 245 (1149)
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCHHHCCCEEE
T ss_conf 14798665266258889999999988999974189806656552486526899860577878888623553310144037
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-CCCEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHCC
Q ss_conf 4034455889999999999999886515434102458972-883499822765433201678863256201123222102
Q gi|254780268|r 238 EEAHSPVISAQDRTEIGETCVKAMKKIDYRGAGTIEFLYE-NGQFYFIEMNTRLQVEHPVTEAITGIDLVHEQIYVASEN 316 (443)
Q Consensus 238 EeaPap~l~~~~~~~i~~~A~~~~~~~g~~g~~tvEFl~~-~~~~yflEvN~Rlqveh~vte~~tgvdlv~~~~~~a~g~ 316 (443)
T Consensus 246 E~APa~~L~~~~R~~ic~~Avkla~~~~Y~~AGTvEFLvd~~~~fyFIEvNPRiQVEHTiTE~vTgiDIV~aQi~ia~G~ 325 (1149)
T COG1038 246 EVAPAPYLSPELRDEICDDAVKLARNIGYINAGTVEFLVDEDGKFYFIEVNPRIQVEHTITEEITGIDIVKAQIHIAAGA 325 (1149)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEEEEEECHHHHHHHHHHHCCC
T ss_conf 85688889999999999999999997397656647888738886899995473456776455441216788789885356
Q ss_pred CCC------CCCCCCCCCHHHHHHHCCCCCCC-CCCCCCCCEEEEECCCCCCEEEECC-CCCCCEECCCCCCCEEEEEEE
Q ss_conf 222------21133332012453302456622-1111244215886689984467776-023877077768433899995
Q gi|254780268|r 317 RLS------VQQKDITFSGHAIECRINAEDPE-NFIPNPGEITYFHAPGGLGIRMDSA-SYQGYTVPSYYDSLIAKLIVH 388 (443)
Q Consensus 317 ~l~------~~~~~i~~~g~aie~Ri~aEdp~-~f~Ps~G~i~~~~~p~~~gvRvDt~-~~~G~~i~~~yDsmlaKiI~~ 388 (443)
T Consensus 326 ~l~~~e~glp~q~dI~~~G~AiQcRITTEDP~n~F~PDtGrI~aYRs~gGfGVRLD~Gn~~~GavItpyyDslLVK~t~~ 405 (1149)
T COG1038 326 TLHTPELGLPQQKDIRTHGYAIQCRITTEDPENGFIPDTGRITAYRSAGGFGVRLDGGNAYAGAVITPYYDSLLVKVTCW 405 (1149)
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEECCCCCCCEEEEEEC
T ss_conf 56874459974444033643788774133745477888752788862787438745776656646314455414456324
Q ss_pred CCCHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHCCHHHHCCCCCHHHHHHH
Q ss_conf 5998999999998765408826377888999896898895588653168751
Q gi|254780268|r 389 GKNRKECMMRLNRALNEIIIDGIKTTIPLFQKLIKNEDIIEGNYDIHWLENK 440 (443)
Q Consensus 389 g~~R~~Ai~~l~~aL~~~~I~Gv~TN~~~l~~il~~~~f~~g~~~T~fi~~~ 440 (443)
T Consensus 406 ~~t~e~a~~km~RaL~EfrIrGVkTNi~FL~~vl~h~~F~~g~y~T~FId~t 457 (1149)
T COG1038 406 GSTFEEAIRKMIRALREFRIRGVKTNIPFLEAVLNHPDFRSGRYTTSFIDTT 457 (1149)
T ss_pred CCCHHHHHHHHHHHHHHHEECCEECCCHHHHHHHCCCCCCCCCCEEEECCCC
T ss_conf 8998999999999888845112132818999985595302686323340589