HHsearch alignment for GI: 254780268 and conserved domain: PRK12815
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=100.00 E-value=0 Score=432.60 Aligned_cols=388 Identities=21% Similarity=0.277 Sum_probs=326.8
Q ss_pred CEEEEEECCCHHH-----------HHHHHHHHHCCCEEEEECCCHHHCCCCHHHCCEEEECCCCCCCCHHCCHHHHHHHH
Q ss_conf 7068664470999-----------99999888809659998585577187767585799918998530006989999999
Q gi|254780268|r 2 ISKILIANRGEIA-----------LRILRACKELGIPTVAVHSTADSGAMHVRLADESVCIGPPSSKDSYLNIQQIVAAC 70 (443)
Q Consensus 2 ~~~iLianrGeia-----------~riira~~elGi~tv~v~s~~D~~a~~~~~ADe~~~i~~~~~~~sYldi~~ii~~a 70 (443)
T Consensus 7 ikkvLiiGsGpi~IGqa~EfDysg~qA~~aLkeeG~~vvlvN~NPaTi~TD~~~ad~vY~eP--------lt~e~v~~Ii 78 (1068)
T PRK12815 7 IKKILVIGSGPIIIGQAAEFDYSGTQACKALKEEGYQVVLVNPNPATIMTDPEPADTVYFEP--------LTLEFVKRII 78 (1068)
T ss_pred CCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCEEEECC--------CCHHHHHHHH
T ss_conf 88899989881531234465656999999999869989998898326208987444378858--------9899999999
Q ss_pred HHCCCCEEECCCC---HHHCCHHHHH--HHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf 8709989945853---1310976668--8984592162689899987218998877664224433243334557999873
Q gi|254780268|r 71 EVTGADAIHPGYG---FLSENAKFAE--ILEDHHIKFIGPSSEHIKIMGDKITAKKTAQQLGIPVVPGSGEVYPHTAMPI 145 (443)
Q Consensus 71 ~~~~~daihPGyG---fLsEn~~fa~--~~e~~Gi~fIGPs~~ai~~~gDK~~~k~~a~~~GVP~~p~~~~~~~~ea~~~ 145 (443)
T Consensus 79 ~~E~Pd~il~~~GGqtaLnla~~L~~~GiL~k~~v~llGt~~~~I~~aedR~~f~~~m~~ig~~~~~s~~~~s~~ea~~~ 158 (1068)
T PRK12815 79 RREKPDALLATLGGQTALNLAVKLLEAGILEQYGVELLGTNVEAIQKGEDRERFRALMKELGEPVPESEIVDSEEEALRF 158 (1068)
T ss_pred HHHCCCEEEECCCCHHHHHHHHHHHHCCCHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHH
T ss_conf 97499989867778479999999997597786596496799999986459999999999769999970521999999999
Q ss_pred HHCCCCHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCCC
Q ss_conf 20033012200023457821688875066899999875432125899816884434201103315777347870236566
Q gi|254780268|r 146 AKEIGFPVLVKASAGGGGRGMRIAYSENDLSEAIDQARSEALAAFGNDAVYIEKYLENPRHIEVQIFGDGMGNAIHFGER 225 (443)
Q Consensus 146 a~~iGyPviiKp~~gGGG~Gi~vv~~~~el~~a~~~a~~ea~~~fgd~~vlvEk~i~~~rhiEvqVl~D~~g~~v~l~er 225 (443)
T Consensus 159 a~~ig~PvivRps~~lGg~g~~i~~n~~eL~~~~~~~~~~S~----~~~vlie~sl~gwkEie~ev~RD~~~n~i~v--- 231 (1068)
T PRK12815 159 AEKIGFPIIVRPAYTLGGDGGGIAENEEELEQLARQGLQASP----IHQCLLEESIAGWKEIEYEVMRDRNDNCVTV--- 231 (1068)
T ss_pred HHHCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHCC----CCCEEEEHHCCCCEEEEEEEEEECCCCEEEE---
T ss_conf 986699899983610668965044599999999999996399----9857865011797699999999889897998---
Q ss_pred CCCCCCCCCEEEE------ECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--CCCEEEEECCCCCCCCCHHH
Q ss_conf 5421135622554------034455889999999999999886515434102458972--88349982276543320167
Q gi|254780268|r 226 DCSVQRRNQKIWE------EAHSPVISAQDRTEIGETCVKAMKKIDYRGAGTIEFLYE--NGQFYFIEMNTRLQVEHPVT 297 (443)
Q Consensus 226 dCSiQrr~qkiiE------eaPap~l~~~~~~~i~~~A~~~~~~~g~~g~~tvEFl~~--~~~~yflEvN~Rlqveh~vt 297 (443)
T Consensus 232 -c~mEnidP~GIHTGDSi~vaP~qTL~d~e~q~lR~~a~~I~~~lgv~G~~NiQFAv~p~~~~~~VIEvNPR~SRssala 310 (1068)
T PRK12815 232 -CNMENIDPVGVHTGDSIVVAPSQTLTDDEYQMLRSASLKIIRALGVVGGCNIQFALDPRSKQYYVIEVNPRVSRSSALA 310 (1068)
T ss_pred -EECCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCEECCEEEEEEECCCCCCEEEEECCCCCCCHHHHH
T ss_conf -5412354454356774534578126999999999999999997280101057998869998289996478622024788
Q ss_pred HHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC--EEEEECCCCCCEEEECCCCCCCEEC
Q ss_conf 88632562011232221022222113333201245330245662211112442--1588668998446777602387707
Q gi|254780268|r 298 EAITGIDLVHEQIYVASENRLSVQQKDITFSGHAIECRINAEDPENFIPNPGE--ITYFHAPGGLGIRMDSASYQGYTVP 375 (443)
Q Consensus 298 e~~tgvdlv~~~~~~a~g~~l~~~~~~i~~~g~aie~Ri~aEdp~~f~Ps~G~--i~~~~~p~~~gvRvDt~~~~G~~i~ 375 (443)
T Consensus 311 SKATGyPiAkvaaklalG~~L~ei~n~iTg~-----------t~A~fEP~lDyvvvK~P~~~F~kf~~~d~~Lg------ 373 (1068)
T PRK12815 311 SKATGYPIAKIAAKLAVGYTLDEIKNPLTGL-----------TYASFEPTLDYVVVKFPRWPFDKFGYADRTLG------ 373 (1068)
T ss_pred HHHCCCCHHHHHHHHHCCCCHHHCCCCCCCC-----------CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC------
T ss_conf 8750884899999986388777706641377-----------30333775776999740566444678875447------
Q ss_pred CCCCCC--EEEEEEECCCHHHHHHHHHHHHHHCEECCCC-------CCHHHHHHHHCCHH
Q ss_conf 776843--3899995599899999999876540882637-------78889998968988
Q gi|254780268|r 376 SYYDSL--IAKLIVHGKNRKECMMRLNRALNEIIIDGIK-------TTIPLFQKLIKNED 426 (443)
Q Consensus 376 ~~yDsm--laKiI~~g~~R~~Ai~~l~~aL~~~~I~Gv~-------TN~~~l~~il~~~~ 426 (443)
T Consensus 374 t---~Mks~Gevm~igr~f~eA~~KAlrsle-~~~~g~~~~~~~~~~~~~~l~~~L~~p~ 429 (1068)
T PRK12815 374 T---QMKATGEVMAIGRNFESAFQKALRSLE-IKRNGLSLPELESGKSEEELLQDLRTPD 429 (1068)
T ss_pred C---CCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCHHHHHHHHCCCC
T ss_conf 5---123332220030028999999998633-5767767765455678999999855899