HHsearch alignment for GI: 254780268 and conserved domain: TIGR02712

>TIGR02712 urea_carbox urea carboxylase; InterPro: IPR014084 Members of this family are ATP-dependent urea carboxylases, including characterised members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae (Baker's yeast). The allophanate hydrolase domain of the yeast enzyme is not included in this entry and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from O. sagaranensis was shown to be highly active on acetamide and formamide as well as urea..
Probab=100.00  E-value=0  Score=1307.58  Aligned_cols=438  Identities=44%  Similarity=0.767  Sum_probs=428.9

Q ss_pred             CEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHCCCCHHHCCEEEECCCCCCCCHHCCHHHHHHHHHHCCCCEEECC
Q ss_conf             70686644709999999988880965999858557718776758579991899853000698999999987099899458
Q gi|254780268|r    2 ISKILIANRGEIALRILRACKELGIPTVAVHSTADSGAMHVRLADESVCIGPPSSKDSYLNIQQIVAACEVTGADAIHPG   81 (443)
Q Consensus         2 ~~~iLianrGeia~riira~~elGi~tv~v~s~~D~~a~~~~~ADe~~~i~~~~~~~sYldi~~ii~~a~~~~~daihPG   81 (443)
T Consensus         1 F~~vLiANRGEIA~RiirTL~~lgi~sVAvYS~aD~~s~HV~~AD~A~~Lg~~~A~esYL~~dkil~~Ak~tGA~AI~PG   80 (1226)
T TIGR02712         1 FKTVLIANRGEIAVRIIRTLRKLGIRSVAVYSDADRASQHVLDADEAVCLGGATAAESYLDIDKILAIAKKTGAQAIHPG   80 (1226)
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHCCCEECCCCCCHHHHHCCHHHHHHHHHHCCCCEEECC
T ss_conf             96567764437999999998771863798632100215782360502605895413222147899999975589387458


Q ss_pred             CCHHHCCHHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHHHCCCCHHHHHCCCC
Q ss_conf             53131097666889845921626898999872189988776642244332433345-57999873200330122000234
Q gi|254780268|r   82 YGFLSENAKFAEILEDHHIKFIGPSSEHIKIMGDKITAKKTAQQLGIPVVPGSGEV-YPHTAMPIAKEIGFPVLVKASAG  160 (443)
Q Consensus        82 yGfLsEn~~fa~~~e~~Gi~fIGPs~~ai~~~gDK~~~k~~a~~~GVP~~p~~~~~-~~~ea~~~a~~iGyPviiKp~~g  160 (443)
T Consensus        81 YGFLSENA~FA~~C~~aGI~FvGPtpe~ir~fGLKHtAR~lA~~aGVPL~PGTgLL~sl~eA~~~A~~IGYPVMlKSTAG  160 (1226)
T TIGR02712        81 YGFLSENAAFAEACEAAGIVFVGPTPEQIRKFGLKHTARELAEAAGVPLLPGTGLLESLDEALEAAKEIGYPVMLKSTAG  160 (1226)
T ss_pred             CCCCCCCHHHHHHHHHCCCEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             87235787799899847957877870667443832568999996688988851558779999999864699547987078


Q ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf             57821688875066899999875432125899816884434201103315777347870236566542113562255403
Q gi|254780268|r  161 GGGRGMRIAYSENDLSEAIDQARSEALAAFGNDAVYIEKYLENPRHIEVQIFGDGMGNAIHFGERDCSVQRRNQKIWEEA  240 (443)
Q Consensus       161 GGG~Gi~vv~~~~el~~a~~~a~~ea~~~fgd~~vlvEk~i~~~rhiEvqVl~D~~g~~v~l~erdCSiQrr~qkiiEea  240 (443)
T Consensus       161 GGGIGl~~c~~~~eL~~aFe~Vkrlg~~~F~daGVFlErfv~~ARHvEVQifGDG~G~v~aLGeRDCSLQRRNQKVvEET  240 (1226)
T TIGR02712       161 GGGIGLQKCDNAAELAEAFETVKRLGESFFGDAGVFLERFVENARHVEVQIFGDGKGKVVALGERDCSLQRRNQKVVEET  240 (1226)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEC
T ss_conf             76524511189899999999989988632363514340320378428998752697336997116754444566558727


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--CCCEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCC
Q ss_conf             4455889999999999999886515434102458972--88349982276543320167886325620112322210222
Q gi|254780268|r  241 HSPVISAQDRTEIGETCVKAMKKIDYRGAGTIEFLYE--NGQFYFIEMNTRLQVEHPVTEAITGIDLVHEQIYVASENRL  318 (443)
Q Consensus       241 Pap~l~~~~~~~i~~~A~~~~~~~g~~g~~tvEFl~~--~~~~yflEvN~Rlqveh~vte~~tgvdlv~~~~~~a~g~~l  318 (443)
T Consensus       241 PAP~LP~~~R~~L~~AA~~Lg~~V~YrSAGTVEFiYD~~~d~FYFLEVNTRLQVEHPvTE~VtGlDLVEWM~r~AAg~~p  320 (1226)
T TIGR02712       241 PAPNLPEETRAALLAAAEKLGEAVNYRSAGTVEFIYDEARDEFYFLEVNTRLQVEHPVTEMVTGLDLVEWMVRIAAGELP  320 (1226)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHCCCCC
T ss_conf             74686489999999999999997187637604774022108712113234111335730178464089899997168888


Q ss_pred             CCCCCCC------CCCHHHHHHHCCCCCC-CCCCCCCCCEEEEECCCC--CCEEEECCCCCCCEECCCCCCCEEEEEEEC
Q ss_conf             2211333------3201245330245662-211112442158866899--844677760238770777684338999955
Q gi|254780268|r  319 SVQQKDI------TFSGHAIECRINAEDP-ENFIPNPGEITYFHAPGG--LGIRMDSASYQGYTVPSYYDSLIAKLIVHG  389 (443)
Q Consensus       319 ~~~~~~i------~~~g~aie~Ri~aEdp-~~f~Ps~G~i~~~~~p~~--~gvRvDt~~~~G~~i~~~yDsmlaKiI~~g  389 (443)
T Consensus       321 ~~~~~~~~~~~~l~p~G~aiEaRvYAEnP~k~F~PSpG~Lt~V~FP~~~G~~~RvDTWV~~Gtevsp~YDPmlAKiIv~g  400 (1226)
T TIGR02712       321 DFDSLNIEIFDNLTPRGAAIEARVYAENPAKNFQPSPGLLTEVQFPDDGGKAVRVDTWVETGTEVSPEYDPMLAKIIVHG  400 (1226)
T ss_pred             CHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECEECCCCEECCCCCCCEEEEEECC
T ss_conf             85244300035788750389999844077677726986068877278889537870211278356776587424466436


Q ss_pred             CCHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHCCHHHHCCCCCHHHHHH
Q ss_conf             99899999999876540882637788899989689889558865316875
Q gi|254780268|r  390 KNRKECMMRLNRALNEIIIDGIKTTIPLFQKLIKNEDIIEGNYDIHWLEN  439 (443)
Q Consensus       390 ~~R~~Ai~~l~~aL~~~~I~Gv~TN~~~l~~il~~~~f~~g~~~T~fi~~  439 (443)
T Consensus       401 ~~R~~A~~kL~~AL~~T~v~Gi~TNLdYLr~i~~s~~F~~g~~sT~~L~~  450 (1226)
T TIGR02712       401 KDREDAIAKLSQALDETRVYGIETNLDYLRSILSSEVFRSGQVSTRLLNS  450 (1226)
T ss_pred             CCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHCC
T ss_conf             79789999999887301012354247899988401334102577664005