HHsearch alignment for GI: 254780268 and conserved domain: TIGR02712
>TIGR02712 urea_carbox urea carboxylase; InterPro: IPR014084 Members of this family are ATP-dependent urea carboxylases, including characterised members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae (Baker's yeast). The allophanate hydrolase domain of the yeast enzyme is not included in this entry and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from O. sagaranensis was shown to be highly active on acetamide and formamide as well as urea..
Probab=100.00 E-value=0 Score=1307.58 Aligned_cols=438 Identities=44% Similarity=0.767 Sum_probs=428.9
Q ss_pred CEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHCCCCHHHCCEEEECCCCCCCCHHCCHHHHHHHHHHCCCCEEECC
Q ss_conf 70686644709999999988880965999858557718776758579991899853000698999999987099899458
Q gi|254780268|r 2 ISKILIANRGEIALRILRACKELGIPTVAVHSTADSGAMHVRLADESVCIGPPSSKDSYLNIQQIVAACEVTGADAIHPG 81 (443)
Q Consensus 2 ~~~iLianrGeia~riira~~elGi~tv~v~s~~D~~a~~~~~ADe~~~i~~~~~~~sYldi~~ii~~a~~~~~daihPG 81 (443)
T Consensus 1 F~~vLiANRGEIA~RiirTL~~lgi~sVAvYS~aD~~s~HV~~AD~A~~Lg~~~A~esYL~~dkil~~Ak~tGA~AI~PG 80 (1226)
T TIGR02712 1 FKTVLIANRGEIAVRIIRTLRKLGIRSVAVYSDADRASQHVLDADEAVCLGGATAAESYLDIDKILAIAKKTGAQAIHPG 80 (1226)
T ss_pred CCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHCCCEECCCCCCHHHHHCCHHHHHHHHHHCCCCEEECC
T ss_conf 96567764437999999998771863798632100215782360502605895413222147899999975589387458
Q ss_pred CCHHHCCHHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHHHCCCCHHHHHCCCC
Q ss_conf 53131097666889845921626898999872189988776642244332433345-57999873200330122000234
Q gi|254780268|r 82 YGFLSENAKFAEILEDHHIKFIGPSSEHIKIMGDKITAKKTAQQLGIPVVPGSGEV-YPHTAMPIAKEIGFPVLVKASAG 160 (443)
Q Consensus 82 yGfLsEn~~fa~~~e~~Gi~fIGPs~~ai~~~gDK~~~k~~a~~~GVP~~p~~~~~-~~~ea~~~a~~iGyPviiKp~~g 160 (443)
T Consensus 81 YGFLSENA~FA~~C~~aGI~FvGPtpe~ir~fGLKHtAR~lA~~aGVPL~PGTgLL~sl~eA~~~A~~IGYPVMlKSTAG 160 (1226)
T TIGR02712 81 YGFLSENAAFAEACEAAGIVFVGPTPEQIRKFGLKHTARELAEAAGVPLLPGTGLLESLDEALEAAKEIGYPVMLKSTAG 160 (1226)
T ss_pred CCCCCCCHHHHHHHHHCCCEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 87235787799899847957877870667443832568999996688988851558779999999864699547987078
Q ss_pred CCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 57821688875066899999875432125899816884434201103315777347870236566542113562255403
Q gi|254780268|r 161 GGGRGMRIAYSENDLSEAIDQARSEALAAFGNDAVYIEKYLENPRHIEVQIFGDGMGNAIHFGERDCSVQRRNQKIWEEA 240 (443)
Q Consensus 161 GGG~Gi~vv~~~~el~~a~~~a~~ea~~~fgd~~vlvEk~i~~~rhiEvqVl~D~~g~~v~l~erdCSiQrr~qkiiEea 240 (443)
T Consensus 161 GGGIGl~~c~~~~eL~~aFe~Vkrlg~~~F~daGVFlErfv~~ARHvEVQifGDG~G~v~aLGeRDCSLQRRNQKVvEET 240 (1226)
T TIGR02712 161 GGGIGLQKCDNAAELAEAFETVKRLGESFFGDAGVFLERFVENARHVEVQIFGDGKGKVVALGERDCSLQRRNQKVVEET 240 (1226)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEC
T ss_conf 76524511189899999999989988632363514340320378428998752697336997116754444566558727
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--CCCEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCC
Q ss_conf 4455889999999999999886515434102458972--88349982276543320167886325620112322210222
Q gi|254780268|r 241 HSPVISAQDRTEIGETCVKAMKKIDYRGAGTIEFLYE--NGQFYFIEMNTRLQVEHPVTEAITGIDLVHEQIYVASENRL 318 (443)
Q Consensus 241 Pap~l~~~~~~~i~~~A~~~~~~~g~~g~~tvEFl~~--~~~~yflEvN~Rlqveh~vte~~tgvdlv~~~~~~a~g~~l 318 (443)
T Consensus 241 PAP~LP~~~R~~L~~AA~~Lg~~V~YrSAGTVEFiYD~~~d~FYFLEVNTRLQVEHPvTE~VtGlDLVEWM~r~AAg~~p 320 (1226)
T TIGR02712 241 PAPNLPEETRAALLAAAEKLGEAVNYRSAGTVEFIYDEARDEFYFLEVNTRLQVEHPVTEMVTGLDLVEWMVRIAAGELP 320 (1226)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHCCCCC
T ss_conf 74686489999999999999997187637604774022108712113234111335730178464089899997168888
Q ss_pred CCCCCCC------CCCHHHHHHHCCCCCC-CCCCCCCCCEEEEECCCC--CCEEEECCCCCCCEECCCCCCCEEEEEEEC
Q ss_conf 2211333------3201245330245662-211112442158866899--844677760238770777684338999955
Q gi|254780268|r 319 SVQQKDI------TFSGHAIECRINAEDP-ENFIPNPGEITYFHAPGG--LGIRMDSASYQGYTVPSYYDSLIAKLIVHG 389 (443)
Q Consensus 319 ~~~~~~i------~~~g~aie~Ri~aEdp-~~f~Ps~G~i~~~~~p~~--~gvRvDt~~~~G~~i~~~yDsmlaKiI~~g 389 (443)
T Consensus 321 ~~~~~~~~~~~~l~p~G~aiEaRvYAEnP~k~F~PSpG~Lt~V~FP~~~G~~~RvDTWV~~Gtevsp~YDPmlAKiIv~g 400 (1226)
T TIGR02712 321 DFDSLNIEIFDNLTPRGAAIEARVYAENPAKNFQPSPGLLTEVQFPDDGGKAVRVDTWVETGTEVSPEYDPMLAKIIVHG 400 (1226)
T ss_pred CHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECEECCCCEECCCCCCCEEEEEECC
T ss_conf 85244300035788750389999844077677726986068877278889537870211278356776587424466436
Q ss_pred CCHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHCCHHHHCCCCCHHHHHH
Q ss_conf 99899999999876540882637788899989689889558865316875
Q gi|254780268|r 390 KNRKECMMRLNRALNEIIIDGIKTTIPLFQKLIKNEDIIEGNYDIHWLEN 439 (443)
Q Consensus 390 ~~R~~Ai~~l~~aL~~~~I~Gv~TN~~~l~~il~~~~f~~g~~~T~fi~~ 439 (443)
T Consensus 401 ~~R~~A~~kL~~AL~~T~v~Gi~TNLdYLr~i~~s~~F~~g~~sT~~L~~ 450 (1226)
T TIGR02712 401 KDREDAIAKLSQALDETRVYGIETNLDYLRSILSSEVFRSGQVSTRLLNS 450 (1226)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHCC
T ss_conf 79789999999887301012354247899988401334102577664005