>gnl|CDD|129605 TIGR00514, accC, acetyl-CoA carboxylase, biotin carboxylase subunit. This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification. Length = 449

Score = 669 bits (1728), Expect = 0.0 Identities = 269/444 (60%), Positives = 342/444 (77%), Gaps = 4/444 (0%) Query: 1 MISKILIANRGEIALRILRACKELGIPTVAVHSTADSGAMHVRLADESVCIGPPSSKDSY 60 M+ KILIANRGEIALRILRACKELGI TVAVHSTAD A+HV LADE+VCIGP S SY Sbjct: 1 MLDKILIANRGEIALRILRACKELGIKTVAVHSTADRDALHVLLADEAVCIGPAPSAKSY 60 Query: 61 LNIQQIVAACEVTGADAIHPGYGFLSENAKFAEILEDHHIKFIGPSSEHIKIMGDKITAK 120 LNI I++A E+TGADAIHPGYGFLSENA FAE E FIGPS+E I++MGDK++A Sbjct: 61 LNIPNIISAAEITGADAIHPGYGFLSENANFAEQCERSGFTFIGPSAESIRLMGDKVSAI 120 Query: 121 KTAQQLGIPVVPGSGEVYPHT--AMPIAKEIGFPVLVKASAGGGGRGMRIAYSENDLSEA 178 +T ++ G+P VPGS + + IAK IG+PV++KA+AGGGGRGMR+ ++L ++ Sbjct: 121 ETMKKAGVPCVPGSDGLVEDEEENVRIAKRIGYPVIIKATAGGGGRGMRVVREPDELVKS 180 Query: 179 IDQARSEALAAFGNDAVYIEKYLENPRHIEVQIFGDGMGNAIHFGERDCSVQRRNQKIWE 238 I R+EA AAFGND VYIEKY+ENPRH+E+Q+ D GNAI+ GERDCS+QRR+QK+ E Sbjct: 181 ISMTRAEAKAAFGNDGVYIEKYIENPRHVEIQVLADKYGNAIYLGERDCSIQRRHQKLLE 240 Query: 239 EAHSPVISAQDRTEIGETCVKAMKKIDYRGAGTIEFLYE-NGQFYFIEMNTRLQVEHPVT 297 EA SP ++ + R ++G+ VKA I YRGAGT+EFL + NG+FYF+EMNTR+QVEHPVT Sbjct: 241 EAPSPALTPELRRKMGDAAVKAAVSIGYRGAGTVEFLLDKNGEFYFMEMNTRIQVEHPVT 300 Query: 298 EAITGIDLVHEQIYVASENRLSVQQKDITFSGHAIECRINAEDP-ENFIPNPGEITYFHA 356 E ITG+DL+ EQI +A+ LS++Q+D+ GHAIECRINAEDP + F+P+PG IT + Sbjct: 301 EMITGVDLIKEQIRIAAGEPLSLKQEDVVVRGHAIECRINAEDPIKTFLPSPGRITRYLP 360 Query: 357 PGGLGIRMDSASYQGYTVPSYYDSLIAKLIVHGKNRKECMMRLNRALNEIIIDGIKTTIP 416 PGG G+R DS Y GYTVP YYDS+I KLI +GK R+ + R+ RAL+E IIDGIKTTIP Sbjct: 361 PGGPGVRWDSHVYSGYTVPPYYDSMIGKLITYGKTREVAIARMKRALSEFIIDGIKTTIP 420 Query: 417 LFQKLIKNEDIIEGNYDIHWLENK 440 Q+++++E+ G +IH+LE K Sbjct: 421 FHQRILEDENFQHGGTNIHYLEKK 444

RPSBLAST alignment for GI: 254780268 and conserved domain: TIGR00514