HHSEARCH alignment of GI: 254780269 and SCOP domain: d1lrza3

Alignment

Probab=95.98  E-value=0.058  Score=30.73  Aligned_cols=131  Identities=5%  Similarity=-0.110  Sum_probs=82.5

Q ss_pred             CCHHHHHHHHC---CCCEEEECC--CHHHHHHHHHCCCCCCCCCCCHHHHHHH-HHHHHHCCCEEEEEEEECCCEEEEEE
Q ss_conf             17457765215---881687669--8899999985026688998726999999-99998649826999965372012110
Q gi|254780269|r   28 TPKRLKKYIRR---ELYDIRINT--AFESVISACAQKTQKRPTTWINMTIQKA-YIDLFYMGYAHTIEAWKKDVLVGGLY  101 (179)
Q Consensus        28 isrsLrk~lrk---~~~~itin~--~F~~VI~~Ca~~r~~~~~TWI~~~i~~a-Y~~Lh~~G~aHSvE~w~~~~LvGGly  101 (179)
                      .+++.|+.||+   +..+|+.-+  +++...+--+.....+.-+--+.+.... +..+  .+.+.-+-++.+|++|||.+
T Consensus        10 ~~~~~Rr~Irka~k~gv~i~~~~~~~l~~f~~l~~~~~~r~g~~~~~~~~~~~l~~~~--~~~~~l~~a~~~~~~ia~~l   87 (182)
T d1lrza3          10 MDGLRKRNTKKVKKNGVKVRFLSEEELPIFRSFMEDTSESKAFADRDDKFYYNRLKYY--KDRVLVPLAYINELPISAGF   87 (182)
T ss_dssp             SCHHHHHHHHHHHTSSCEEEECCGGGHHHHHHHC------------CHHHHHHHHHHH--GGGEECEEEEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC--CCCEEEEEEECCCCCEEEEE
T ss_conf             6897999999999779889983778899999999999984689999999999999855--16275454641786089998


Q ss_pred             EEEECCCEEEEEEEE----ECCCHHHHHHHHHHHHHHHCCCEEEEE-CCCC------------HHHHHCCCEEECH
Q ss_conf             232057212003445----257689999999999999689739990-7589------------3477119798369
Q gi|254780269|r  102 GVSLGAVFFGESMFS----HMENASKICLTHLVKHLKKRQFLLLDI-QFIT------------NHLRQFGAIEITH  160 (179)
Q Consensus       102 Gv~iG~~F~GESMFs----~~~nASKiAl~~L~~~l~~~g~~liD~-Q~~t------------~HL~slGa~~i~r  160 (179)
                      .+..|.....--.=+    +...|+.+..+...+.++.+|+..+|- +..+            ..+.++|+..++.
T Consensus        88 ~~~~~~~~~y~~~~~~~~~~~~~~~~ll~~~~i~~a~~~G~~~~D~gG~~~~~~~~~~~~Gl~~FK~~fg~~~v~~  163 (182)
T d1lrza3          88 FFINPFEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHGIDRYNFYGVSGKFTEDAEDAGVVKFKKGYNAEIIEY  163 (182)
T ss_dssp             EEECSSCEEEEEEEECGGGGGGCHHHHHHHHHHHHHHHTTCCEEEEEECCSCCSTTCTTHHHHHHHHTTTCEEEEE
T ss_pred             EEEECHHHEEEECEECCCHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEE
T ss_conf             7763001115301021421104844899999999998759718984686788888764431999997069950634

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: FemXAB nonribosomal peptidyltransferases
domain: Methicillin resistance protein FemA
species: Staphylococcus aureus [TaxId: 1280]