HHSEARCH alignment of GI: 254780269 and SCOP domain: d2cxaa1

Alignment
>d2cxaa1 d.108.1.6 (A:1-232) Leucyl/phenylalanyl-tRNA-protein transferase, LFTR (Aat) {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=513.01  Aligned_cols=174  Identities=35%  Similarity=0.600  Sum_probs=165.8

Q ss_pred             CCCCCCCCEEEEECCCCCEEEEHHHCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             98887887078873996187424446117457765215881687669889999998502668899872699999999998
Q gi|254780269|r    1 MADSANSQDISWIKPLRRGIIPLETFHTPKRLKKYIRRELYDIRINTAFESVISACAQKTQKRPTTWINMTIQKAYIDLF   80 (179)
Q Consensus         1 Mad~~d~~~i~WwsP~~R~il~~~~~hisrsLrk~lrk~~~~itin~~F~~VI~~Ca~~r~~~~~TWI~~~i~~aY~~Lh   80 (179)
                      |++  +++||+||||+||+||+|++|||||||||.+|+++|+||+|++|++||++||.++  +++|||+++|+++|++||
T Consensus        49 w~~--~~~~i~WwsP~~R~vl~~~~~~iskslrk~lk~~~f~itin~~F~~VI~~Ca~~~--~~~tWI~~~ii~aY~~Lh  124 (232)
T d2cxaa1          49 WFS--PGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDR--EEGTWITRGVVEAYHRLH  124 (232)
T ss_dssp             CCC--TTSCCEEECCSSEEEECGGGCCCCHHHHHHHHTCCCEEEESSCHHHHHHHHHTC-----CTTCCHHHHHHHHHHH
T ss_pred             CCC--CCCCEEEEECCCCEEECCCCCCCCHHHHHHHCCCCCEEEECCHHHHHHHHCCCCC--CCCCCHHHHHHHHHHHHH
T ss_conf             786--9997699960799898777753576899987258966877805899998207899--878040489999999998


Q ss_pred             HCCCEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCEEECH
Q ss_conf             64982699996537201211023205721200344525768999999999999968973999075893477119798369
Q gi|254780269|r   81 YMGYAHTIEAWKKDVLVGGLYGVSLGAVFFGESMFSHMENASKICLTHLVKHLKKRQFLLLDIQFITNHLRQFGAIEITH  160 (179)
Q Consensus        81 ~~G~aHSvE~w~~~~LvGGlyGv~iG~~F~GESMFs~~~nASKiAl~~L~~~l~~~g~~liD~Q~~t~HL~slGa~~i~r  160 (179)
                      ++|+|||||||++++||||+|||+||++||||||||+++|||||||++|+++|+.+||.+||||++||||+||||++|||
T Consensus       125 ~~G~AHSVEvw~~~~LvGGlYGv~iG~~F~GESMFs~~~nASKvAl~~L~~~L~~~g~~liD~Q~~t~HL~slGa~~I~R  204 (232)
T d2cxaa1         125 ELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPR  204 (232)
T ss_dssp             HTTSEEEEEEEETTEEEEEEEEEEETTEEEEEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEESCCHHHHHTTCEEECH
T ss_pred             HCCEEEEEEEEECCEEEEEEEEEEECCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCEECCH
T ss_conf             67868998898558068745678728858876410148977899999999999978981999676888898629988289


Q ss_pred             HHHHHHHHHHHHCC--CCCC
Q ss_conf             99999999998389--9887
Q gi|254780269|r  161 VQYAKLLENALKHP--EISF  178 (179)
Q Consensus       161 ~~fl~~L~~al~~p--~~~w  178 (179)
                      ++|+++|++++.+|  ...|
T Consensus       205 ~~fl~~L~~~~~~~~~~~~w  224 (232)
T d2cxaa1         205 RDYLNYLNQMRLGRLPNNFW  224 (232)
T ss_dssp             HHHHHHHHHHTTCCCCTTTT
T ss_pred             HHHHHHHHHHHCCCCCCCCC
T ss_conf             99999999996389986677


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: LFTR-like
domain: Leucyl/phenylalanyl-tRNA-protein transferase, LFTR (Aat)
species: Escherichia coli [TaxId: 562]