Query gi|254780269|ref|YP_003064682.1| leucyl/phenylalanyl-tRNA--protein transferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 179
No_of_seqs 123 out of 910
Neff 4.9
Searched_HMMs 13730
Date Tue May 24 10:44:08 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780269.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cxaa1 d.108.1.6 (A:1-232) Le 100.0 0 0 513.0 22.5 174 1-178 49-224 (232)
2 d1ne9a2 d.108.1.4 (A:165-335) 96.6 0.026 1.9E-06 32.8 11.4 128 30-158 7-149 (171)
3 d1lrza3 d.108.1.4 (A:166-244,A 96.0 0.058 4.2E-06 30.7 13.3 131 28-160 10-163 (182)
4 d2fr1a1 c.2.1.2 (A:1657-1915) 62.5 5.3 0.00039 18.7 5.3 58 119-176 157-226 (259)
5 d1euva_ d.3.1.7 (A:) Ulp1 prot 56.8 6 0.00044 18.4 3.8 18 63-80 44-61 (221)
6 d1i4ma_ d.6.1.1 (A:) Prion pro 39.4 3.2 0.00023 20.1 0.2 21 94-114 1-21 (108)
7 d2j0pa1 e.62.1.1 (A:4-341) Hem 31.7 17 0.0012 15.7 3.0 88 45-137 25-158 (338)
8 d2hq2a1 e.62.1.1 (A:1-337) Hem 26.6 17 0.0012 15.7 2.1 87 45-136 26-158 (337)
9 d1u3ma_ d.6.1.1 (A:) Prion pro 25.8 8.6 0.00062 17.5 0.5 23 94-116 1-23 (117)
10 d1wb0a1 c.1.8.5 (A:22-266,A:33 24.2 23 0.0016 14.9 2.7 93 65-172 48-146 (297)
11 d2bkra1 d.3.1.7 (A:1-212) Sent 24.1 21 0.0015 15.1 2.3 19 63-81 22-40 (212)
12 d1th0a_ d.3.1.7 (A:) Sentrin-s 21.7 24 0.0018 14.7 2.2 18 63-80 43-60 (226)
13 d1u5la_ d.6.1.1 (A:) Prion pro 20.1 11 0.00081 16.7 0.2 21 94-114 1-21 (107)
No 1
>d2cxaa1 d.108.1.6 (A:1-232) Leucyl/phenylalanyl-tRNA-protein transferase, LFTR (Aat) {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=0 Score=513.01 Aligned_cols=174 Identities=35% Similarity=0.600 Sum_probs=165.8
Q ss_pred CCCCCCCCEEEEECCCCCEEEEHHHCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 98887887078873996187424446117457765215881687669889999998502668899872699999999998
Q gi|254780269|r 1 MADSANSQDISWIKPLRRGIIPLETFHTPKRLKKYIRRELYDIRINTAFESVISACAQKTQKRPTTWINMTIQKAYIDLF 80 (179)
Q Consensus 1 Mad~~d~~~i~WwsP~~R~il~~~~~hisrsLrk~lrk~~~~itin~~F~~VI~~Ca~~r~~~~~TWI~~~i~~aY~~Lh 80 (179)
|++ +++||+||||+||+||+|++|||||||||.+|+++|+||+|++|++||++||.++ +++|||+++|+++|++||
T Consensus 49 w~~--~~~~i~WwsP~~R~vl~~~~~~iskslrk~lk~~~f~itin~~F~~VI~~Ca~~~--~~~tWI~~~ii~aY~~Lh 124 (232)
T d2cxaa1 49 WFS--PGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDR--EEGTWITRGVVEAYHRLH 124 (232)
T ss_dssp CCC--TTSCCEEECCSSEEEECGGGCCCCHHHHHHHHTCCCEEEESSCHHHHHHHHHTC-----CTTCCHHHHHHHHHHH
T ss_pred CCC--CCCCEEEEECCCCEEECCCCCCCCHHHHHHHCCCCCEEEECCHHHHHHHHCCCCC--CCCCCHHHHHHHHHHHHH
T ss_conf 786--9997699960799898777753576899987258966877805899998207899--878040489999999998
Q ss_pred HCCCEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCEEECH
Q ss_conf 64982699996537201211023205721200344525768999999999999968973999075893477119798369
Q gi|254780269|r 81 YMGYAHTIEAWKKDVLVGGLYGVSLGAVFFGESMFSHMENASKICLTHLVKHLKKRQFLLLDIQFITNHLRQFGAIEITH 160 (179)
Q Consensus 81 ~~G~aHSvE~w~~~~LvGGlyGv~iG~~F~GESMFs~~~nASKiAl~~L~~~l~~~g~~liD~Q~~t~HL~slGa~~i~r 160 (179)
++|+|||||||++++||||+|||+||++||||||||+++|||||||++|+++|+.+||.+||||++||||+||||++|||
T Consensus 125 ~~G~AHSVEvw~~~~LvGGlYGv~iG~~F~GESMFs~~~nASKvAl~~L~~~L~~~g~~liD~Q~~t~HL~slGa~~I~R 204 (232)
T d2cxaa1 125 ELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPR 204 (232)
T ss_dssp HTTSEEEEEEEETTEEEEEEEEEEETTEEEEEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEESCCHHHHHTTCEEECH
T ss_pred HCCEEEEEEEEECCEEEEEEEEEEECCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCEECCH
T ss_conf 67868998898558068745678728858876410148977899999999999978981999676888898629988289
Q ss_pred HHHHHHHHHHHHCC--CCCC
Q ss_conf 99999999998389--9887
Q gi|254780269|r 161 VQYAKLLENALKHP--EISF 178 (179)
Q Consensus 161 ~~fl~~L~~al~~p--~~~w 178 (179)
++|+++|++++.+| ...|
T Consensus 205 ~~fl~~L~~~~~~~~~~~~w 224 (232)
T d2cxaa1 205 RDYLNYLNQMRLGRLPNNFW 224 (232)
T ss_dssp HHHHHHHHHHTTCCCCTTTT
T ss_pred HHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999996389986677
No 2
>d1ne9a2 d.108.1.4 (A:165-335) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]}
Probab=96.59 E-value=0.026 Score=32.79 Aligned_cols=128 Identities=10% Similarity=0.088 Sum_probs=79.0
Q ss_pred HHHHHHHHCCCCEEEECCC---HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEEEEC
Q ss_conf 4577652158816876698---8999999850266889987269999999999864982699996537201211023205
Q gi|254780269|r 30 KRLKKYIRRELYDIRINTA---FESVISACAQKTQKRPTTWINMTIQKAYIDLFYMGYAHTIEAWKKDVLVGGLYGVSLG 106 (179)
Q Consensus 30 rsLrk~lrk~~~~itin~~---F~~VI~~Ca~~r~~~~~TWI~~~i~~aY~~Lh~~G~aHSvE~w~~~~LvGGlyGv~iG 106 (179)
+.+||..| ...+|..... ++...+..........-+..+.+..+...+....+...-+.+..+|++|+|..-+..|
T Consensus 7 ~~Irka~k-~gv~i~~~~~~e~~~~f~~l~~~~~~r~g~~~~~~~~~~~l~~~~~~~~~~l~~~~~~g~~va~~l~~~~~ 85 (171)
T d1ne9a2 7 SKIKRPFR-DGVEVHSGNSATELDEFFKTYTTMAERHGITHRPIEYFQRMQAAFDADTMRIFVAEREGKLLSTGIALKYG 85 (171)
T ss_dssp HHHHHHHH-TTEEEEEECSHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHSCTTTEEEEEEEETTEEEEEEEEEEET
T ss_pred HHHHHHHH-CCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEEEEEEC
T ss_conf 99999998-79889986998999999999999851446788897999999874378839999997299079999999987
Q ss_pred CC---EEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECC-----CCH----HHHHCCCEEE
Q ss_conf 72---1200344525768999999999999968973999075-----893----4771197983
Q gi|254780269|r 107 AV---FFGESMFSHMENASKICLTHLVKHLKKRQFLLLDIQF-----ITN----HLRQFGAIEI 158 (179)
Q Consensus 107 ~~---F~GESMFs~~~nASKiAl~~L~~~l~~~g~~liD~Q~-----~t~----HL~slGa~~i 158 (179)
.. ++|-|.-.....||..-++...++++.+|+..+|-.= .+| -..+||+..+
T Consensus 86 ~~~~y~~~a~~~~~~~~~~~~L~~~~i~~~~~~G~~~~D~gG~~~~~~~~gl~~FK~~fgg~~~ 149 (171)
T d1ne9a2 86 RKIWYMYAGSMDGNTYYAPYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFKHVFVKDAP 149 (171)
T ss_dssp TEEEEEEEEECSSCCTTHHHHHHHHHHHHHHHTTCSEEEEEECSCSSTTCHHHHHHHHHCCSCC
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCC
T ss_conf 8799997320444322427899999999999829819995798788888478998656599975
No 3
>d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]}
Probab=95.98 E-value=0.058 Score=30.73 Aligned_cols=131 Identities=5% Similarity=-0.110 Sum_probs=82.5
Q ss_pred CCHHHHHHHHC---CCCEEEECC--CHHHHHHHHHCCCCCCCCCCCHHHHHHH-HHHHHHCCCEEEEEEEECCCEEEEEE
Q ss_conf 17457765215---881687669--8899999985026688998726999999-99998649826999965372012110
Q gi|254780269|r 28 TPKRLKKYIRR---ELYDIRINT--AFESVISACAQKTQKRPTTWINMTIQKA-YIDLFYMGYAHTIEAWKKDVLVGGLY 101 (179)
Q Consensus 28 isrsLrk~lrk---~~~~itin~--~F~~VI~~Ca~~r~~~~~TWI~~~i~~a-Y~~Lh~~G~aHSvE~w~~~~LvGGly 101 (179)
.+++.|+.||+ +..+|+.-+ +++...+--+.....+.-+--+.+.... +..+ .+.+.-+-++.+|++|||.+
T Consensus 10 ~~~~~Rr~Irka~k~gv~i~~~~~~~l~~f~~l~~~~~~r~g~~~~~~~~~~~l~~~~--~~~~~l~~a~~~~~~ia~~l 87 (182)
T d1lrza3 10 MDGLRKRNTKKVKKNGVKVRFLSEEELPIFRSFMEDTSESKAFADRDDKFYYNRLKYY--KDRVLVPLAYINELPISAGF 87 (182)
T ss_dssp SCHHHHHHHHHHHTSSCEEEECCGGGHHHHHHHC------------CHHHHHHHHHHH--GGGEECEEEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC--CCCEEEEEEECCCCCEEEEE
T ss_conf 6897999999999779889983778899999999999984689999999999999855--16275454641786089998
Q ss_pred EEEECCCEEEEEEEE----ECCCHHHHHHHHHHHHHHHCCCEEEEE-CCCC------------HHHHHCCCEEECH
Q ss_conf 232057212003445----257689999999999999689739990-7589------------3477119798369
Q gi|254780269|r 102 GVSLGAVFFGESMFS----HMENASKICLTHLVKHLKKRQFLLLDI-QFIT------------NHLRQFGAIEITH 160 (179)
Q Consensus 102 Gv~iG~~F~GESMFs----~~~nASKiAl~~L~~~l~~~g~~liD~-Q~~t------------~HL~slGa~~i~r 160 (179)
.+..|.....--.=+ +...|+.+..+...+.++.+|+..+|- +..+ ..+.++|+..++.
T Consensus 88 ~~~~~~~~~y~~~~~~~~~~~~~~~~ll~~~~i~~a~~~G~~~~D~gG~~~~~~~~~~~~Gl~~FK~~fg~~~v~~ 163 (182)
T d1lrza3 88 FFINPFEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHGIDRYNFYGVSGKFTEDAEDAGVVKFKKGYNAEIIEY 163 (182)
T ss_dssp EEECSSCEEEEEEEECGGGGGGCHHHHHHHHHHHHHHHTTCCEEEEEECCSCCSTTCTTHHHHHHHHTTTCEEEEE
T ss_pred EEEECHHHEEEECEECCCHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEE
T ss_conf 7763001115301021421104844899999999998759718984686788888764431999997069950634
No 4
>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=62.46 E-value=5.3 Score=18.73 Aligned_cols=58 Identities=19% Similarity=0.355 Sum_probs=45.8
Q ss_pred CCHHHHHHHHHHHHHHHCCCEEEEECC------------CCHHHHHCCCEEECHHHHHHHHHHHHHCCCC
Q ss_conf 768999999999999968973999075------------8934771197983699999999999838998
Q gi|254780269|r 119 ENASKICLTHLVKHLKKRQFLLLDIQF------------ITNHLRQFGAIEITHVQYAKLLENALKHPEI 176 (179)
Q Consensus 119 ~nASKiAl~~L~~~l~~~g~~liD~Q~------------~t~HL~slGa~~i~r~~fl~~L~~al~~p~~ 176 (179)
-.|||.++-.|++.++..|....-.++ ..+.+...|...++-++..+.|..++..+..
T Consensus 157 YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~~~l~~~~~ 226 (259)
T d2fr1a1 157 YAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAEV 226 (259)
T ss_dssp THHHHHHHHHHHHHHHHTTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 9999871999999998678888978778215776556069999996699888999999999999837996
No 5
>d1euva_ d.3.1.7 (A:) Ulp1 protease C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=56.77 E-value=6 Score=18.38 Aligned_cols=18 Identities=28% Similarity=0.685 Sum_probs=13.9
Q ss_pred CCCCCCHHHHHHHHHHHH
Q ss_conf 899872699999999998
Q gi|254780269|r 63 RPTTWINMTIQKAYIDLF 80 (179)
Q Consensus 63 ~~~TWI~~~i~~aY~~Lh 80 (179)
+++.|+|..+|++|.++-
T Consensus 44 ~~~~WLnD~iIn~y~~~l 61 (221)
T d1euva_ 44 APRRWLNDTIIEFFMKYI 61 (221)
T ss_dssp STTCCCBHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHH
T ss_conf 898625759999999999
No 6
>d1i4ma_ d.6.1.1 (A:) Prion protein domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.45 E-value=3.2 Score=20.07 Aligned_cols=21 Identities=33% Similarity=0.517 Sum_probs=17.5
Q ss_pred CCEEEEEEEEEECCCEEEEEE
Q ss_conf 720121102320572120034
Q gi|254780269|r 94 DVLVGGLYGVSLGAVFFGESM 114 (179)
Q Consensus 94 ~~LvGGlyGv~iG~~F~GESM 114 (179)
|.+|||+-|..+|++|-+-.|
T Consensus 1 gav~g~~~gY~lG~am~rp~~ 21 (108)
T d1i4ma_ 1 GAVVGGLGGYMLGSAMSRPII 21 (108)
T ss_dssp CCCCTTCTTCEECCCCCCCCC
T ss_pred CCCCHHHHHHHHCCCCCCCCC
T ss_conf 952000134543246788876
No 7
>d2j0pa1 e.62.1.1 (A:4-341) Hemin transport protein HemS {Yersinia enterocolitica [TaxId: 630]}
Probab=31.67 E-value=17 Score=15.69 Aligned_cols=88 Identities=11% Similarity=0.198 Sum_probs=56.5
Q ss_pred ECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE----------E-EEECCCEEEEEEEEEECC------
Q ss_conf 66988999999850266889987269999999999864982699----------9-965372012110232057------
Q gi|254780269|r 45 INTAFESVISACAQKTQKRPTTWINMTIQKAYIDLFYMGYAHTI----------E-AWKKDVLVGGLYGVSLGA------ 107 (179)
Q Consensus 45 in~~F~~VI~~Ca~~r~~~~~TWI~~~i~~aY~~Lh~~G~aHSv----------E-~w~~~~LvGGlyGv~iG~------ 107 (179)
+|---.+++.++- ++.-+.+.+++.+...+|-..|...++ - +|.+.+ .+|-||+.+|.
T Consensus 25 LgvSEaeLvaA~~----g~~v~rL~~~~~~lL~~l~~lG~VmaltrN~~aVhE~~G~y~~~~-~~g~~~l~l~~~~idLR 99 (338)
T d2j0pa1 25 MGISEAELTHSRV----SHDAKRLKGDARALLAALEAVGEVKAITRNTYAVHEQMGRYENQH-LNGHAGLILNPRNLDLR 99 (338)
T ss_dssp TTSCHHHHHHHHB----TTTEEEBCSCHHHHHHHGGGGCCEEEEEECSSEEEEEEECCCSEE-CSSSEEEECCTTSSCEE
T ss_pred HCCCHHHHHHHCC----CCCEEECCCCHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCC-CCCCEEEEECCCCEEEE
T ss_conf 2999999997276----774698678999999876641846899827867999986448852-37804689868741799
Q ss_pred CEE---------------------------EEEEE--EECCCHHHHHHHHHHHHHHHCC
Q ss_conf 212---------------------------00344--5257689999999999999689
Q gi|254780269|r 108 VFF---------------------------GESMF--SHMENASKICLTHLVKHLKKRQ 137 (179)
Q Consensus 108 ~F~---------------------------GESMF--s~~~nASKiAl~~L~~~l~~~g 137 (179)
+|+ |+.|| +..++...-|.-+|+..+....
T Consensus 100 lf~~~w~~~faV~~~~~~g~~~SlQFFD~~G~avhKIyl~~~Sd~~A~~~Lv~~~~~~~ 158 (338)
T d2j0pa1 100 LFLNQWASAFTLTEETRHGVRHSIQFFDHQGDALHKVYVTEQTDMPAWEALLAQFITTE 158 (338)
T ss_dssp EEGGGEEEEEEEEEEETTEEEEEEEEEETTSCEEEEEECCTTSCHHHHHHHHHHHBCSC
T ss_pred EEHHHCEEEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 88320108999973178985488997747783467887179998899999999861656
No 8
>d2hq2a1 e.62.1.1 (A:1-337) Heme oxygenase ChuS {Escherichia coli O157:H7 [TaxId: 83334]}
Probab=26.55 E-value=17 Score=15.69 Aligned_cols=87 Identities=15% Similarity=0.241 Sum_probs=54.5
Q ss_pred ECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE----------E-EEECCCEEEEEEEEEECC------
Q ss_conf 66988999999850266889987269999999999864982699----------9-965372012110232057------
Q gi|254780269|r 45 INTAFESVISACAQKTQKRPTTWINMTIQKAYIDLFYMGYAHTI----------E-AWKKDVLVGGLYGVSLGA------ 107 (179)
Q Consensus 45 in~~F~~VI~~Ca~~r~~~~~TWI~~~i~~aY~~Lh~~G~aHSv----------E-~w~~~~LvGGlyGv~iG~------ 107 (179)
++-.-.+++.++- ++.-+.+..++.+....|-..|...++ - +|.+.+ .+|-||+.++.
T Consensus 26 LgvSEaelvaA~~----g~~v~rL~~~~~~lL~~L~~lG~VmalTrN~~~VhE~~G~y~~~~-~~g~~~l~l~~~~IdLR 100 (337)
T d2hq2a1 26 MNIREAELAFARV----THDAWRMHGDIREILAALESVGETKCICRNEYAVHEQVGTFTNQH-LNGHAGLILNPRALDLR 100 (337)
T ss_dssp TTSCHHHHHHHHB----TTTEEEECSCHHHHHHHHGGGCCEEEEEECSSEEEEEEECCCSEE-CSSSSEEECCTTSCCEE
T ss_pred HCCCHHHHHHHCC----CCCEEECCCCHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCC-CCCEEEEEECCCCEEEE
T ss_conf 0999999997177----652798787899999876642846899827868998875337831-37805789868740699
Q ss_pred CEE---------------------------EEEEE--EECCCHHHHHHHHHHHHHHHC
Q ss_conf 212---------------------------00344--525768999999999999968
Q gi|254780269|r 108 VFF---------------------------GESMF--SHMENASKICLTHLVKHLKKR 136 (179)
Q Consensus 108 ~F~---------------------------GESMF--s~~~nASKiAl~~L~~~l~~~ 136 (179)
+|+ |+.|| +..++....|.-.|++.+...
T Consensus 101 lf~~~w~~~faV~~~~~~g~~~SlQFFD~~G~AvhKVylt~~Sd~~A~~~Lv~~~~~~ 158 (337)
T d2hq2a1 101 LFLNQWASVFHIKENTARGERQSIQFFDHQGDALLKVYATDNTDMAAWSELLARFITD 158 (337)
T ss_dssp ECGGGEEEEEEEEECCTTSCEEEEEEEETTSCEEEEEECCTTSCHHHHHHHHHHHBCS
T ss_pred EEHHHCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 8721030899998517898536489886878301467606899889999999986276
No 9
>d1u3ma_ d.6.1.1 (A:) Prion protein domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=25.77 E-value=8.6 Score=17.46 Aligned_cols=23 Identities=35% Similarity=0.544 Sum_probs=18.4
Q ss_pred CCEEEEEEEEEECCCEEEEEEEE
Q ss_conf 72012110232057212003445
Q gi|254780269|r 94 DVLVGGLYGVSLGAVFFGESMFS 116 (179)
Q Consensus 94 ~~LvGGlyGv~iG~~F~GESMFs 116 (179)
|..||||=|..+|++-.+-+|--
T Consensus 1 gsvvgglggYmlGsaMsr~~~hF 23 (117)
T d1u3ma_ 1 GSVVGGLGGYAMGRVMSGMNYHF 23 (117)
T ss_dssp CCSSSCSSCCEECCCCCCCSCCC
T ss_pred CCCCCCCCHHHHHHHHCCCCCCC
T ss_conf 96123530333100113674446
No 10
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.22 E-value=23 Score=14.88 Aligned_cols=93 Identities=20% Similarity=0.345 Sum_probs=54.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEEC--CCHHHHHHHH-HHHHHHHCCCEEE
Q ss_conf 987269999999999864982699996537201211023205721200344525--7689999999-9999996897399
Q gi|254780269|r 65 TTWINMTIQKAYIDLFYMGYAHTIEAWKKDVLVGGLYGVSLGAVFFGESMFSHM--ENASKICLTH-LVKHLKKRQFLLL 141 (179)
Q Consensus 65 ~TWI~~~i~~aY~~Lh~~G~aHSvE~w~~~~LvGGlyGv~iG~~F~GESMFs~~--~nASKiAl~~-L~~~l~~~g~~li 141 (179)
..|=.+.+.+.+..|.+.+- .+.++ ++|||-=.+.+.|+.. +.++.-+|+. ++.+++..||+=|
T Consensus 48 ~~~~~~~~~~~~~~lk~~~p--~lKvl-----------lSiGG~~~~~~~fs~~~~~~~~R~~Fi~siv~~l~~y~fDGi 114 (297)
T d1wb0a1 48 TEWNDETLYQEFNGLKKMNP--KLKTL-----------LAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGL 114 (297)
T ss_dssp SSTTHHHHHHHHHHGGGTCT--TCEEE-----------EEEECTTTCSHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCHHHHHHHHHHHHHCC--CCEEE-----------EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 77550889999999997499--97399-----------998546566615789863369999999999999998099946
Q ss_pred EECCCCHHHHHCCCEEECHH---HHHHHHHHHHH
Q ss_conf 90758934771197983699---99999999983
Q gi|254780269|r 142 DIQFITNHLRQFGAIEITHV---QYAKLLENALK 172 (179)
Q Consensus 142 D~Q~~t~HL~slGa~~i~r~---~fl~~L~~al~ 172 (179)
|..|..|-. .|...-.+. .|++.|+.++.
T Consensus 115 DiDWE~p~~--~~~~~~d~~n~~~l~~~Lr~~l~ 146 (297)
T d1wb0a1 115 DLDWEYPGS--QGSPAVDKERFTTLVQDLANAFQ 146 (297)
T ss_dssp EEECSCTTS--TTCCTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCC--CCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 588786034--69886788779999999998876
No 11
>d2bkra1 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SENP8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.14 E-value=21 Score=15.08 Aligned_cols=19 Identities=26% Similarity=0.551 Sum_probs=14.1
Q ss_pred CCCCCCHHHHHHHHHHHHH
Q ss_conf 8998726999999999986
Q gi|254780269|r 63 RPTTWINMTIQKAYIDLFY 81 (179)
Q Consensus 63 ~~~TWI~~~i~~aY~~Lh~ 81 (179)
+++.|+|..+|+.|.++-.
T Consensus 22 ~~~~WLND~iId~y~~~l~ 40 (212)
T d2bkra1 22 DPPSWLNDHIIGFAFEYFA 40 (212)
T ss_dssp STTSCCBHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHH
T ss_conf 9998809999999999999
No 12
>d1th0a_ d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.75 E-value=24 Score=14.69 Aligned_cols=18 Identities=22% Similarity=0.658 Sum_probs=14.8
Q ss_pred CCCCCCHHHHHHHHHHHH
Q ss_conf 899872699999999998
Q gi|254780269|r 63 RPTTWINMTIQKAYIDLF 80 (179)
Q Consensus 63 ~~~TWI~~~i~~aY~~Lh 80 (179)
+++.|+|..+|++|.++-
T Consensus 43 ~~~~WLnD~iI~~y~~~l 60 (226)
T d1th0a_ 43 KNYHWLNDEVINFYMNLL 60 (226)
T ss_dssp STTCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHH
T ss_conf 798636649999999999
No 13
>d1u5la_ d.6.1.1 (A:) Prion protein domain {Red-eared slider turtle (Trachemys scripta) [TaxId: 34903]}
Probab=20.14 E-value=11 Score=16.75 Aligned_cols=21 Identities=43% Similarity=0.689 Sum_probs=16.8
Q ss_pred CCEEEEEEEEEECCCEEEEEE
Q ss_conf 720121102320572120034
Q gi|254780269|r 94 DVLVGGLYGVSLGAVFFGESM 114 (179)
Q Consensus 94 ~~LvGGlyGv~iG~~F~GESM 114 (179)
|..||||=|..+|++-.+-.|
T Consensus 1 gsvvgglggymlg~amsr~~~ 21 (107)
T d1u5la_ 1 GSVVGGLGGYALGSAMSGMRM 21 (107)
T ss_dssp CCSCSSCTTSEECCCCSSCCC
T ss_pred CCCCCCCHHHHHHHHHCCCCC
T ss_conf 972335204555323226765
Done!