HHsearch alignment for GI: 254780270 and conserved domain: COG0464
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].
Probab=99.59 E-value=1.3e-13 Score=121.90 Aligned_cols=221 Identities=23% Similarity=0.345 Sum_probs=151.3
Q ss_pred HHHCHHHHHHHHHHHHHHHHHCCC-------CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCC
Q ss_conf 520116899999999999984244-------4673599860565650279999997708824998618888888835632
Q gi|254780270|r 340 DHFGLEKVKERIIEYLAVQMRVIK-------NKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHR 412 (820)
Q Consensus 340 ~hyGl~~vK~rile~lav~~~~~~-------~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~ 412 (820)
T Consensus 243 diggl~~~k~~l~e~v~~~~~~~e~~~~~~~~~~~giLl~GpPGtGKT~lAkava~~~~~~fi~v~~~~l~s-------- 314 (494)
T COG0464 243 DIGGLEEAKEELKEAIETPLKRPELFRKLGLRPPKGVLLYGPPGTGKTLLAKAVALESRSRFISVKGSELLS-------- 314 (494)
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCHHHHH--------
T ss_conf 323637799999999999997088763258988836999889997589999998754498248843355540--------
Q ss_pred CCCCCCCCHHHHHHHHHCCCCC-EEEEEECHHHHHHHCCCC-------HHHHHHHHCCCCCCCCEEEEECCCCCCCCCEE
Q ss_conf 0014567128999998327887-399993315542311771-------15566554060016813320103523644279
Q gi|254780270|r 413 RTYIGSMPGRIIQSLKRAKRSN-PLLLLDEIDKMGSDLRGD-------PSAALLEVLDPAQNSSFVDHYLEVEYDLSDVM 484 (820)
Q Consensus 413 ~ty~ga~pg~ii~~l~~~~~~n-pv~~ldeidk~~~~~~gd-------p~~allevldp~qn~~f~d~y~~~~~dls~v~ 484 (820)
T Consensus 315 -k~vGesek~ir~~F~~A~~~~p~iifiDEiDs~~~~r~~~~~~~~~rv~~~ll~~~d~~-------------e~~~~v~ 380 (494)
T COG0464 315 -KWVGESEKNIRELFEKARKLAPSIIFIDEIDSLASGRGPSEDGSGRRVVGQLLTELDGI-------------EKAEGVL 380 (494)
T ss_pred -HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC-------------CCCCCEE
T ss_conf -77659999999999999966998897488666741289987637999999999997475-------------4437648
Q ss_pred EEEECCCCC-CCHHHCC--CE-EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHH
Q ss_conf 999348655-4413117--24-7998258786899989998608989986257813132289999999731774102347
Q gi|254780270|r 485 FIMTANTLN-IPLPLMD--RM-EIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRS 560 (820)
Q Consensus 485 fi~tan~~~-i~~~l~d--rm-e~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~ 560 (820)
T Consensus 381 vi~aTN~p~~ld~a~lR~gRfd~~i~v~~pd~~~r~~i~~~~~~~~~~~---~---~~~~~~~~l~~~t~~~s---g--- 448 (494)
T COG0464 381 VIAATNRPDDLDPALLRPGRFDRLIYVPLPDLEERLEIFKIHLRDKKPP---L---AEDVDLEELAEITEGYS---G--- 448 (494)
T ss_pred EEECCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCC---H---HHHHHHHHHHHHHCCCC---H---
T ss_conf 9964798332687562436630378717989899999999985415651---1---55641999998752778---9---
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCC
Q ss_conf 8887999989876542117852012796786753052
Q gi|254780270|r 561 FERALMKIARKAVTKIVKNSDTTVSINENNLQDYLGV 597 (820)
Q Consensus 561 l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~~~lg~ 597 (820)
T Consensus 449 --adi~~i~~ea~~~~~~~~~-~~~~~~~~~~~a~~~ 482 (494)
T COG0464 449 --ADIAALVREAALEALREAR-RREVTLDDFLDALKK 482 (494)
T ss_pred --HHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHH
T ss_conf --9999999999998998545-776349999999862