HHsearch alignment for GI: 254780270 and conserved domain: COG0464

>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].

Probab=95.72  E-value=0.023  Score=36.69  Aligned_cols=130  Identities=25%  Similarity=0.394  Sum_probs=77.0

Q ss_pred             HCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCE-EEE
Q ss_conf             4244467359986056565027999999770882499861888888883563200145671289999983278873-999
Q gi|254780270|r  360 RVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNP-LLL  438 (820)
Q Consensus       360 ~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~np-v~~  438 (820)
T Consensus        12 ~~~~~~~~~v~~~g~~~~~~t~~~~~~a~~-~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~~~ii~   81 (494)
T COG0464          12 KLGIEPPKGVLLHGPPGTGKTLLARALANE-GAEF--LSINGPEILSK-------YVGESELRLRELFEEAEKLAPSIIF   81 (494)
T ss_pred             HHCCCCCCCCCCCCCCCCCHHHHHHHHHHC-CCCC--CCCCCCHHHHH-------HCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             706676421000368876503665676512-5410--13565224322-------2051089999998999863976364


Q ss_pred             EECHHHHHHHCCCC-------HHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCC-CCCHH-----HCCCEEEE
Q ss_conf             93315542311771-------1556655406001681332010352364427999934865-54413-----11724799
Q gi|254780270|r  439 LDEIDKMGSDLRGD-------PSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTL-NIPLP-----LMDRMEII  505 (820)
Q Consensus       439 ldeidk~~~~~~gd-------p~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~-~i~~~-----l~drme~i  505 (820)
T Consensus        82 ~d~~~~~~~~~~~~~~~~~~~v~~~l~~~~d~~~-------------~~~-v~~~~~~~~~~~~~~a~~~~~~~~~~~~~  147 (494)
T COG0464          82 IDEIDALAPKRSSDQGEVERRVVAQLLALMDGLK-------------RGQ-VIVIGATNRPDGLDPAKRRPGRFDREIEV  147 (494)
T ss_pred             ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-------------CCC-EEEEECCCCCCCHHHHHHCCHHHHHHHHH
T ss_conf             0443321234444421045789998998764246-------------563-46741344532112777531376788763


Q ss_pred             EECCCCHH
Q ss_conf             82587868
Q gi|254780270|r  506 RIAGYTEE  513 (820)
Q Consensus       506 ~~~~y~~~  513 (820)
T Consensus       148 ~~~~~~~~  155 (494)
T COG0464         148 NLPDEAGR  155 (494)
T ss_pred             CCCCHHCC
T ss_conf             36541014