HHsearch alignment for GI: 254780270 and conserved domain: COG0714

Probab=99.57  E-value=8e-14  Score=123.49  Aligned_cols=173  Identities=29%  Similarity=0.364  Sum_probs=116.7

Q ss_pred             HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
Q ss_conf             06889987766520116899999999999984244467359986056565027999999770882499861888888883
Q gi|254780270|r  329 NLDFAIRILDQDHFGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADI  408 (820)
Q Consensus       329 dl~~a~~iLd~~hyGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i  408 (820)
T Consensus        14 ~~~~~~~~~~~~~~g~~~~~~~~l~a~--------~~~~~vll~G~PG~gKT~la~~lA~~l~~~~~~i~~t~~l~p~d~   85 (329)
T COG0714          14 ILGKIRSELEKVVVGDEEVIELALLAL--------LAGGHVLLEGPPGVGKTLLARALARALGLPFVRIQCTPDLLPSDL   85 (329)
T ss_pred             HHHHHHHHCCCCCCCCHHHHHHHHHHH--------HCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHH
T ss_conf             666666522565526699999999999--------859977877989877799999999983898189956899888882


Q ss_pred             CCC-----C---CCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCC
Q ss_conf             563-----2---00145671289999983278873999933155423117711556655406001681332010352364
Q gi|254780270|r  409 RGH-----R---RTYIGSMPGRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDL  480 (820)
Q Consensus       409 ~gh-----~---~ty~ga~pg~ii~~l~~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dl  480 (820)
T Consensus        86 ~G~~~~~~~~~~~~~~~~~~gpl~~~~~------~ill~DEInra~p~~----q~aLl~~l~e~---~vt~~~~~-~~~~  151 (329)
T COG0714          86 LGTYAYAALLLEPGEFRFVPGPLFAAVR------VILLLDEINRAPPEV----QNALLEALEER---QVTVPGLT-TIRL  151 (329)
T ss_pred             CCHHHHHHHHCCCCEEEEECCCCCCCCC------EEEEEECCCCCCHHH----HHHHHHHHHHC---EEEECCCC-CCCC
T ss_conf             0568887664257718984687334513------389987034589889----99999999726---89707966-5337


Q ss_pred             CC-EEEEEECC-----CC-CCCHHHCCCEEEEEECCCC-H-HHHHHHHHHHH
Q ss_conf             42-79999348-----65-5441311724799825878-6-89998999860
Q gi|254780270|r  481 SD-VMFIMTAN-----TL-NIPLPLMDRMEIIRIAGYT-E-EEKLQIAKNHL  523 (820)
Q Consensus       481 s~-v~fi~tan-----~~-~i~~~l~drme~i~~~~y~-~-~ek~~i~~~~l  523 (820)
T Consensus       152 ~~~f~viaT~Np~e~~g~~~l~eA~ldRf~~~~~v~yp~~~~e~~~i~~~~~  203 (329)
T COG0714         152 PPPFIVIATQNPGEYEGTYPLPEALLDRFLLRIYVDYPDSEEEERIILARVG  203 (329)
T ss_pred             CCCCEEEEECCCCCCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf             9987899826867657887899888810388776489973889999987365