HHsearch alignment for GI: 254780270 and conserved domain: COG1618

Probab=97.57  E-value=5.3e-05  Score=56.69  Aligned_cols=88  Identities=33%  Similarity=0.584  Sum_probs=57.5

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHC-CCCC----------------CCCC--------------
Q ss_conf             99860565650279999997708824998618888888835-6320----------------0145--------------
Q gi|254780270|r  369 LCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIR-GHRR----------------TYIG--------------  417 (820)
Q Consensus       369 l~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~-gh~~----------------ty~g--------------  417 (820)
T Consensus         8 i~ITG~PGvGKtTl~~ki~e~L~~~g--~kvgGf~t-~EVR~gGkR~GF~Ivdl~tg~~~~la~~~~~~~rvGkY~V~v~   84 (179)
T COG1618           8 IFITGRPGVGKTTLVLKIAEKLREKG--YKVGGFIT-PEVREGGKRIGFKIVDLATGEEGILARVGFSRPRVGKYGVNVE   84 (179)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCC--CEEEEEEE-EEEECCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEHH
T ss_conf             99867998458999999999998559--66513983-1142088275159998147955798884788762104786278


Q ss_pred             CCCHHHHHHHHHCCCCCEEEEEECHHHH---HHHCCCCHHHHHHHHCCC
Q ss_conf             6712899999832788739999331554---231177115566554060
Q gi|254780270|r  418 SMPGRIIQSLKRAKRSNPLLLLDEIDKM---GSDLRGDPSAALLEVLDP  463 (820)
Q Consensus       418 a~pg~ii~~l~~~~~~npv~~ldeidk~---~~~~~gdp~~allevldp  463 (820)
T Consensus        85 ~le~i~~~al~rA~~~aDvIIIDEIGpMElks~~f~----~~ve~vl~~  129 (179)
T COG1618          85 GLEEIAIPALRRALEEADVIIIDEIGPMELKSKKFR----EAVEEVLKS  129 (179)
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCHHHH----HHHHHHHCC
T ss_conf             889986899998863499899943363302008899----999999658