HHsearch alignment for GI: 254780270 and conserved domain: COG1750
>COG1750 Archaeal serine proteases [General function prediction only].
Probab=99.68 E-value=5.7e-16 Score=139.75 Aligned_cols=166 Identities=28% Similarity=0.367 Sum_probs=139.5
Q ss_pred CCEEEEEEEEEECCCCCEEE-CCCHHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEECCCCCCCCCCCCHHHHH
Q ss_conf 68079999999748997244-3256899-999999999999998886299855742078147448888478887306899
Q gi|254780270|r 623 GGEILTVEGVIMPGKGEITI-TGNLKEI-MKESILAASSYVRSKATTFGIIPSAFNEINIHVHVPEGATPKDGPSAGIAM 700 (820)
Q Consensus 623 GG~~l~IE~~~~~g~g~l~l-TG~lg~v-mkES~~~A~s~~k~~~~~~~~~~~~~~~~diHih~p~Ga~pKDGPSAGi~i 700 (820)
T Consensus 48 ~gv~~~~~vtv~pG~G~v~v~t~P~t~~d~~~SArvAa~~A~---~~~G---vd~ssyd~~i~v~a~~pVVGgPSagg~m 121 (579)
T COG1750 48 VGVPINISVTVTPGDGRVYVATFPYTQIDMQGSARVAAGVAL---RLAG---VDMSSYDVYIAVEADSPVVGGPSAGGYM 121 (579)
T ss_pred CEEEEEEEEEECCCCCEEEEECCCCCHHCCCHHHHHHHHHHH---HHHC---CCCCCEEEEEEEECCCCEECCCCCCHHH
T ss_conf 302310266652898638863677740022134578888778---8627---8753225899994379743586510075
Q ss_pred HHHHHHHHHCCCCCCCCEEEEEEEECCEEEEECCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCHHH-HCCCEEEECCCH
Q ss_conf 9999999836888756106636850302500065689999999709969980367755077614887-709799981939
Q gi|254780270|r 701 ATAIVSIMTCIPVYKNVAMTGELTLRGRVLPIGGLKEKLLAALRAGVTKVLIPEENIKDLMDIPENV-KNGLEIIPVSFM 779 (820)
Q Consensus 701 ~tal~S~~~~~~v~~~iAmTGEitl~G~VlpiGGi~eK~laA~raGi~~viiP~~N~~d~~~ip~~~-~~~l~~~~v~~~ 779 (820)
T Consensus 122 tva~~~~~~~~~~~~~v~mTG~I~PDgsigpVGGi~~K~~AA~~~g~kifLIP~Gq~~-~~d~~~Y~k~~gl~vieV~~~ 200 (579)
T COG1750 122 TVAIYAALMGWSIRKDVMMTGMINPDGSIGPVGGILEKLEAAAKAGAKIFLIPVGQRI-VVDLVEYGKSLGLKVIEVGTL 200 (579)
T ss_pred HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCC-CCCHHHHHHHCCEEEEEEECH
T ss_conf 9999999957885467056523558874334544588899998579859996055444-530787776426479997002
Q ss_pred HHHHHHHHCCCCCCCC
Q ss_conf 9988876027887655
Q gi|254780270|r 780 GEVLKHALLRMPDPLE 795 (820)
Q Consensus 780 ~evl~~al~~~~~~~~ 795 (820)
T Consensus 201 ~~aiyy~tg~~~e~p~ 216 (579)
T COG1750 201 EDAAYYLTGPQIEPPE 216 (579)
T ss_pred HHHHHHHCCCCCCCCC
T ss_conf 2103454166678997