HHsearch alignment for GI: 254780270 and conserved domain: COG3283
>COG3283 TyrR Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism].
Probab=97.57 E-value=0.0053 Score=41.57 Aligned_cols=166 Identities=24% Similarity=0.347 Sum_probs=116.6
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCC---CEEEEECCCCCC---HHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEE
Q ss_conf 6735998605656502799999977088---249986188888---8883563200145671289999983278873999
Q gi|254780270|r 365 KGLILCFVGPPGVGKTSLAQSIAKATGR---QYVRMSLGGVYD---EADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLL 438 (820)
Q Consensus 365 ~g~il~l~gppgvGKts~~~sia~al~r---~f~~islgg~~d---~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~ 438 (820)
T Consensus 227 DAP-LLI~GeTGTGKdLlAkaCH~~S~R~~~pFlalNCA~lPe~~aEsElFG~apg-~~gk~GffE~A------ngGTVl 298 (511)
T COG3283 227 DAP-LLITGETGTGKDLLAKACHLASPRHSKPFLALNCASLPEDAAESELFGHAPG-DEGKKGFFEQA------NGGTVL 298 (511)
T ss_pred CCC-EEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCC-CCCCCCHHHHC------CCCEEE
T ss_conf 787-6874488861889999874438455897367644779666767777356888-77763463402------697488
Q ss_pred EECHHHHHHHCCCCHHHHHHHHCCCCCCCCEE------EEECCCCCCCCCEEEEEEC---------------------CC
Q ss_conf 93315542311771155665540600168133------2010352364427999934---------------------86
Q gi|254780270|r 439 LDEIDKMGSDLRGDPSAALLEVLDPAQNSSFV------DHYLEVEYDLSDVMFIMTA---------------------NT 491 (820)
Q Consensus 439 ldeidk~~~~~~gdp~~allevldp~qn~~f~------d~y~~~~~dls~v~fi~ta---------------------n~ 491 (820)
T Consensus 299 LDeIgEmSp~lQ----aKLLRFL~---DGtFRRVGee~Ev~vd-------VRVIcatq~nL~~lv~~g~fReDLfyRLNV 364 (511)
T COG3283 299 LDEIGEMSPRLQ----AKLLRFLN---DGTFRRVGEDHEVHVD-------VRVICATQVNLVELVQKGKFREDLFYRLNV 364 (511)
T ss_pred EEHHHHCCHHHH----HHHHHHHC---CCCCCCCCCCCEEEEE-------EEEEECCCCCHHHHHHCCCHHHHHHHHHHE
T ss_conf 500332499899----99999862---7760003775457877-------899961666699998637258878877501
Q ss_pred CC-CCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 55-4413117247998258786899989998608989986257813132289999999731774102347888799
Q gi|254780270|r 492 LN-IPLPLMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALM 566 (820)
Q Consensus 492 ~~-i~~~l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~ 566 (820)
T Consensus 365 Ltl~~PpLRer~~di-----------~pL~e~Fv~q~s~elg~p--~pkl~~~~~~~-L~~y~WpGNVRqL~N~iy 426 (511)
T COG3283 365 LTLNLPPLRERPQDI-----------MPLAELFVQQFSDELGVP--RPKLAADLLTV-LTRYAWPGNVRQLKNAIY 426 (511)
T ss_pred EEECCCCCCCCCCCC-----------HHHHHHHHHHHHHHHCCC--CCCCCHHHHHH-HHHCCCCCCHHHHHHHHH
T ss_conf 342388500065210-----------689999999999975899--87668789999-987799960999999999