HHsearch alignment for GI: 254780270 and conserved domain: KOG0652

Probab=98.56  E-value=6.6e-07  Score=71.13  Aligned_cols=161  Identities=29%  Similarity=0.446  Sum_probs=105.8

Q ss_pred             HHHCHHHHHHHHHHHHHHHHHCCC-------C-CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCC
Q ss_conf             520116899999999999984244-------4-67359986056565027999999770882499861888888883563
Q gi|254780270|r  340 DHFGLEKVKERIIEYLAVQMRVIK-------N-KGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGH  411 (820)
Q Consensus       340 ~hyGl~~vK~rile~lav~~~~~~-------~-~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh  411 (820)
T Consensus       172 DiGGldkQIqELvEAi-VLpmth~ekF~~lgi~pPKGvLmYGPPGTGKTlmARAcAaqT~aTFL--KLAgPQLV------  242 (424)
T KOG0652         172 DIGGLDKQIQELVEAI-VLPMTHKEKFENLGIRPPKGVLMYGPPGTGKTLMARACAAQTNATFL--KLAGPQLV------  242 (424)
T ss_pred             CCCCHHHHHHHHHHHH-CCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHH--HHCCHHHH------
T ss_conf             0325789999999886-14565687887468889972276579997577999999874010688--73264777------


Q ss_pred             CCCCCCCCCHHHHHHHHHCCCCCE-EEEEECHHHHHHH-----CCCCH--HHHHHHHCCCCCCCCEEEEECCCCCCCCCE
Q ss_conf             200145671289999983278873-9999331554231-----17711--556655406001681332010352364427
Q gi|254780270|r  412 RRTYIGSMPGRIIQSLKRAKRSNP-LLLLDEIDKMGSD-----LRGDP--SAALLEVLDPAQNSSFVDHYLEVEYDLSDV  483 (820)
Q Consensus       412 ~~ty~ga~pg~ii~~l~~~~~~np-v~~ldeidk~~~~-----~~gdp--~~allevldp~qn~~f~d~y~~~~~dls~v  483 (820)
T Consensus       243 -QMfIGdGAkLVRDAFaLAKEkaP~IIFIDElDAIGtKRfDSek~GDREVQRTMLELLN--QLDGFss~--------~~v  311 (424)
T KOG0652         243 -QMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN--QLDGFSSD--------DRV  311 (424)
T ss_pred             -HHHHCCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHH--HCCCCCCC--------CCE
T ss_conf             -6653341889999998753349838997300232334365312343899999999998--60489975--------626


Q ss_pred             EEEEECCCCCC-CHHH-----CCCEEEEEECCCCHHHHHHHHHHH
Q ss_conf             99993486554-4131-----172479982587868999899986
Q gi|254780270|r  484 MFIMTANTLNI-PLPL-----MDRMEIIRIAGYTEEEKLQIAKNH  522 (820)
Q Consensus       484 ~fi~tan~~~i-~~~l-----~drme~i~~~~y~~~ek~~i~~~~  522 (820)
T Consensus       312 KviAATNRvDiLDPALlRSGRLDRK--IEfP~Pne~aRarIlQIH  354 (424)
T KOG0652         312 KVIAATNRVDILDPALLRSGRLDRK--IEFPHPNEEARARILQIH  354 (424)
T ss_pred             EEEEECCCCCCCCHHHHHCCCCCCC--CCCCCCCHHHHHHHHHHH
T ss_conf             7885216434348888644664444--348899778988999886