HHsearch alignment for GI: 254780270 and conserved domain: KOG0727
>KOG0727 consensus.
Probab=98.73 E-value=3.5e-07 Score=73.25 Aligned_cols=216 Identities=24% Similarity=0.394 Sum_probs=129.8
Q ss_pred HHHHCHHHHHHHHHHHHHHH-------HHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCC
Q ss_conf 65201168999999999999-------84244467359986056565027999999770882499861888888883563
Q gi|254780270|r 339 QDHFGLEKVKERIIEYLAVQ-------MRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGH 411 (820)
Q Consensus 339 ~~hyGl~~vK~rile~lav~-------~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh 411 (820)
T Consensus 155 ~diggld~qkqeireavelplt~~~ly~qigidpprgvllygppg~gktml~kava~~t~a~firvv------gsefv-- 226 (408)
T KOG0727 155 ADIGGLDVQKQEIREAVELPLTHADLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVV------GSEFV-- 226 (408)
T ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHEEEEC------CHHHH--
T ss_conf 3456621128999988836530788999708899862277579997578999998612611144630------18999--
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCE-EEEEECHHHHHHH-CC---C---CHHHHHHHHCCCCCCCCEEEEECCCCCCCCCE
Q ss_conf 200145671289999983278873-9999331554231-17---7---11556655406001681332010352364427
Q gi|254780270|r 412 RRTYIGSMPGRIIQSLKRAKRSNP-LLLLDEIDKMGSD-LR---G---DPSAALLEVLDPAQNSSFVDHYLEVEYDLSDV 483 (820)
Q Consensus 412 ~~ty~ga~pg~ii~~l~~~~~~np-v~~ldeidk~~~~-~~---g---dp~~allevldp~qn~~f~d~y~~~~~dls~v 483 (820)
T Consensus 227 -qkylgegprmvrdvfrlakenapsiifideidaiatkrfdaqtgadrevqril~elln--qmdgfdq-~-------~nv 295 (408)
T KOG0727 227 -QKYLGEGPRMVRDVFRLAKENAPSIIFIDEIDAIATKRFDAQTGADREVQRILIELLN--QMDGFDQ-T-------TNV 295 (408)
T ss_pred -HHHHCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHH--HCCCCCC-C-------CCE
T ss_conf -9985548389999999876169837986224567664124444631899999999997--5147676-6-------655
Q ss_pred EEEEECCCCC-CCHHH-----CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCH
Q ss_conf 9999348655-44131-----17247998258786899989998608989986257813132289999999731774102
Q gi|254780270|r 484 MFIMTANTLN-IPLPL-----MDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAG 557 (820)
Q Consensus 484 ~fi~tan~~~-i~~~l-----~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaG 557 (820)
T Consensus 296 kvimatnradtldpallrpgrldrk--iefplpdrrqkrlv-----f~titskm~ls~-~vd-----le~~v~rpdkis~ 362 (408)
T KOG0727 296 KVIMATNRADTLDPALLRPGRLDRK--IEFPLPDRRQKRLV-----FSTITSKMNLSD-EVD-----LEDLVARPDKISG 362 (408)
T ss_pred EEEEECCCCCCCCHHHCCCCCCCCC--CCCCCCCHHHHHHH-----HHHHHHCCCCCC-CCC-----HHHHHCCCCCCCH
T ss_conf 8998327555668766287643444--35779854665222-----775431026785-448-----8987418543434
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHH
Q ss_conf 347888799998987654211785201279678675
Q gi|254780270|r 558 VRSFERALMKIARKAVTKIVKNSDTTVSINENNLQD 593 (820)
Q Consensus 558 vR~l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~~ 593 (820)
T Consensus 363 -----adi~aicqeagm~avr~n--ryvvl~kd~e~ 391 (408)
T KOG0727 363 -----ADINAICQEAGMLAVREN--RYVVLQKDFEK 391 (408)
T ss_pred -----HHHHHHHHHHHHHHHHHC--CEEEEHHHHHH
T ss_conf -----669999999768998762--54652777999