HHsearch alignment for GI: 254780270 and conserved domain: KOG0730

Probab=98.78  E-value=9.7e-07  Score=69.86  Aligned_cols=171  Identities=24%  Similarity=0.350  Sum_probs=102.5

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCC--CEEEEEECH
Q ss_conf             673599860565650279999997708824998618888888835632001456712899999832788--739999331
Q gi|254780270|r  365 KGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRS--NPLLLLDEI  442 (820)
Q Consensus       365 ~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~--npv~~ldei  442 (820)
T Consensus       217 ~prg~Ll~gppg~Gkt~l~~aVa~e~~a~~~~i~------~peli---~k~~gEte~~LR~~f~~a~k~~~psii~IdEl  287 (693)
T KOG0730         217 PPRGLLLYGPPGTGKTFLVRAVANEYGAFLFLIN------GPELI---SKFPGETESNLRKAFAEALKFQVPSIIFIDEL  287 (693)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECC------CHHHH---HHCCCCHHHHHHHHHHHHHCCCCCEEEEHHHH
T ss_conf             9987444389999818999999997372257406------28999---85246317789999999866599807758767


Q ss_pred             HHHHHHCCC-C-----HHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCC-CCHHHC----CCEEEEEECCCC
Q ss_conf             554231177-1-----15566554060016813320103523644279999348655-441311----724799825878
Q gi|254780270|r  443 DKMGSDLRG-D-----PSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLN-IPLPLM----DRMEIIRIAGYT  511 (820)
Q Consensus       443 dk~~~~~~g-d-----p~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~-i~~~l~----drme~i~~~~y~  511 (820)
T Consensus       288 d~l~p~r~~~~~~e~Rv~sqlltL~dg~~-------------~~~~vivl~atnrp~sld~alRRgRfd~ev~IgiP--~  352 (693)
T KOG0730         288 DALCPKREGADDVESRVVSQLLTLLDGLK-------------PDAKVIVLAATNRPDSLDPALRRGRFDREVEIGIP--G  352 (693)
T ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHHHHCC-------------CCCCEEEEEECCCCCCCCHHHHCCCCCCEEEECCC--C
T ss_conf             62377643332488899999999985276-------------76746999715885556856524788531574489--8


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             689998999860898998625781313228999999973---1774102347888799998987654211
Q gi|254780270|r  512 EEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIR---LFTHEAGVRSFERALMKIARKAVTKIVK  578 (820)
Q Consensus       512 ~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~---~Yt~EaGvR~l~r~i~~i~r~~~~~~~~  578 (820)
T Consensus       353 ~~~RldIl~~l-----~k~~~~~------~~~~l~~iA~~thGyv---G-----aDL~~l~~ea~~~~~r  403 (693)
T KOG0730         353 SDGRLDILRVL-----TKKMNLL------SDVDLEDIAVSTHGYV---G-----ADLAALCREASLQATR  403 (693)
T ss_pred             CHHHHHHHHHH-----HHHCCCC------CHHHHHHHHHHCCCHH---H-----HHHHHHHHHHHHHHHH
T ss_conf             33588999999-----8616887------2556899998734614---7-----8799999998777665