HHsearch alignment for GI: 254780270 and conserved domain: KOG0733

Probab=99.27  E-value=1.2e-10  Score=99.39  Aligned_cols=193  Identities=26%  Similarity=0.339  Sum_probs=122.2

Q ss_pred             HHHHCHHHHHHHHHHHHHHHHHCCCC-------CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE----CCCCCCHHH
Q ss_conf             65201168999999999999842444-------6735998605656502799999977088249986----188888888
Q gi|254780270|r  339 QDHFGLEKVKERIIEYLAVQMRVIKN-------KGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMS----LGGVYDEAD  407 (820)
Q Consensus       339 ~~hyGl~~vK~rile~lav~~~~~~~-------~g~il~l~gppgvGKts~~~sia~al~r~f~~is----lgg~~d~~~  407 (820)
T Consensus       190 ~diGG~d~~~~el~~li~~-i~~Pe~~~~lGv~PprGvLlHGPPGCGKT~lA~AiAgel~vPf~~isApeivSGvSGESE  268 (802)
T KOG0733         190 SDIGGLDKTLAELCELIIH-IKHPEVFSSLGVRPPRGVLLHGPPGCGKTSLANAIAGELGVPFLSISAPEIVSGVSGESE  268 (802)
T ss_pred             HHCCCHHHHHHHHHHHHHH-HCCCHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCH
T ss_conf             5416738999999999988-528116866287799751644899864789999975212885485141465315575228


Q ss_pred             HCCCCCCCCCCCCHHHHHHHHHCCCCC-EEEEEECHHHHHHHCCC-------CHHHHHHHHCCCCCCCCE-EEEECCCCC
Q ss_conf             356320014567128999998327887-39999331554231177-------115566554060016813-320103523
Q gi|254780270|r  408 IRGHRRTYIGSMPGRIIQSLKRAKRSN-PLLLLDEIDKMGSDLRG-------DPSAALLEVLDPAQNSSF-VDHYLEVEY  478 (820)
Q Consensus       408 i~gh~~ty~ga~pg~ii~~l~~~~~~n-pv~~ldeidk~~~~~~g-------dp~~allevldp~qn~~f-~d~y~~~~~  478 (820)
T Consensus       269 -------------kkiRelF~~A~~~aPcivFiDeIDAI~pkRe~aqreMErRiVaQLlt~mD~l~~~~~~g~-------  328 (802)
T KOG0733         269 -------------KKIRELFDQAKSNAPCIVFIDEIDAITPKREEAQREMERRIVAQLLTSMDELSNEKTKGD-------  328 (802)
T ss_pred             -------------HHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-------
T ss_conf             -------------999999998736697599851100136440457889999999999985100256666899-------


Q ss_pred             CCCCEEEEEECCCCC-CCHHHC-----CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
Q ss_conf             644279999348655-441311-----72479982587868999899986089899862578131322899999997317
Q gi|254780270|r  479 DLSDVMFIMTANTLN-IPLPLM-----DRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLF  552 (820)
Q Consensus       479 dls~v~fi~tan~~~-i~~~l~-----drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Y  552 (820)
T Consensus       329 ---~VlVIgATnRPDslDpaLRRaGRFdrEI~l~vP~e~aR~~-------IL~~~~~~lrl~g---~~d~~qlA~lTPGf  395 (802)
T KOG0733         329 ---PVLVIGATNRPDSLDPALRRAGRFDREICLGVPSETAREE-------ILRIICRGLRLSG---DFDFKQLAKLTPGF  395 (802)
T ss_pred             ---CEEEEECCCCCCCCCHHHHCCCCCCCEEEECCCCHHHHHH-------HHHHHHHHCCCCC---CCCHHHHHHCCCCC
T ss_conf             ---7699824789765587773256553235306896688999-------9999986277787---76899997518875


Q ss_pred             --------CCCCHHHHHHHHH
Q ss_conf             --------7410234788879
Q gi|254780270|r  553 --------THEAGVRSFERAL  565 (820)
Q Consensus       553 --------t~EaGvR~l~r~i  565 (820)
T Consensus       396 VGADL~AL~~~Aa~vAikR~l  416 (802)
T KOG0733         396 VGADLMALCREAAFVAIKRIL  416 (802)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH
T ss_conf             214199999999999999986