HHsearch alignment for GI: 254780270 and conserved domain: KOG0734
>KOG0734 consensus.
Probab=99.11 E-value=1.8e-08 Score=82.88 Aligned_cols=280 Identities=25% Similarity=0.326 Sum_probs=157.7
Q ss_pred CCCHHHHHHHHHHHHHHCHHHHHHHHH---HHHHHHHHCCCCC---CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 221068899877665201168999999---9999998424446---7359986056565027999999770882499861
Q gi|254780270|r 326 TKKNLDFAIRILDQDHFGLEKVKERII---EYLAVQMRVIKNK---GLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSL 399 (820)
Q Consensus 326 ~~~dl~~a~~iLd~~hyGl~~vK~ril---e~lav~~~~~~~~---g~il~l~gppgvGKts~~~sia~al~r~f~~isl 399 (820)
T Consensus 291 ~ev~p~~~~nv~F~dVkG~DEAK~ELeEiVefLkdP~kftrLGGKLPKGVLLvGPPGTGKTlLARAvAGEA~VPFF~~s- 369 (752)
T KOG0734 291 SEVDPEQMKNVTFEDVKGVDEAKQELEEIVEFLKDPTKFTRLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYAS- 369 (752)
T ss_pred CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEECC-
T ss_conf 4468466416550021472789999999999860908764314758885387689997556999986055689747416-
Q ss_pred CCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCC-CEEEEEECHHHHHHHCCC-CHH------HHHHHHCC-CCCCCCEE
Q ss_conf 8888888835632001456712899999832788-739999331554231177-115------56655406-00168133
Q gi|254780270|r 400 GGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRS-NPLLLLDEIDKMGSDLRG-DPS------AALLEVLD-PAQNSSFV 470 (820)
Q Consensus 400 gg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~-npv~~ldeidk~~~~~~g-dp~------~allevld-p~qn~~f~ 470 (820)
T Consensus 370 GSEFdE--------m~VGvGArRVRdLF~aAk~~APcIIFIDEiDavG~kR~~~~~~y~kqTlNQLLvEmDGF~qNe--- 438 (752)
T KOG0734 370 GSEFDE--------MFVGVGARRVRDLFAAAKARAPCIIFIDEIDAVGGKRNPSDQHYAKQTLNQLLVEMDGFKQNE--- 438 (752)
T ss_pred CCCHHH--------HHHCCCHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC---
T ss_conf 620445--------422014899999999987349859997200220566786277899989999999842867688---
Q ss_pred EEECCCCCCCCCEEEEEECCCCC-CCHHH-----CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 20103523644279999348655-44131-----1724799825878689998999860898998625781313228999
Q gi|254780270|r 471 DHYLEVEYDLSDVMFIMTANTLN-IPLPL-----MDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGV 544 (820)
Q Consensus 471 d~y~~~~~dls~v~fi~tan~~~-i~~~l-----~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~ 544 (820)
T Consensus 439 -----------GiIvigATNfpe~LD~AL~RPGRFD~~--v~Vp~PDv~GR~eIL~~yl~k------------i~~~~~V 493 (752)
T KOG0734 439 -----------GIIVIGATNFPEALDKALTRPGRFDRH--VTVPLPDVRGRTEILKLYLSK------------IPLDEDV 493 (752)
T ss_pred -----------CEEEEECCCCHHHHHHHHCCCCCCCEE--EECCCCCCCCHHHHHHHHHHC------------CCCCCCC
T ss_conf -----------669995168745556873488755336--746897733289999999834------------8765677
Q ss_pred HHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHH-----HHCCCCCCCCCHHCCCCCCCCCEEE
Q ss_conf 9999731774-102347888799998987654211785201279678675-----3052000332000223365000000
Q gi|254780270|r 545 LLDIIRLFTH-EAGVRSFERALMKIARKAVTKIVKNSDTTVSINENNLQD-----YLGVPRYKYGKIEGEDQVGIVTGLA 618 (820)
Q Consensus 545 i~~ii~~Yt~-EaGvR~l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~~-----~lg~~~~~~~~~~~~~~~G~v~GLa 618 (820)
T Consensus 494 D~~iiARGT~GFsG-Ad----LaNlVNqAAlkAa~dg--a~~VtM~~LE~akDrIlMG~ERks~-~i~~eak~----~TA 561 (752)
T KOG0734 494 DPKIIARGTPGFSG-AD----LANLVNQAALKAAVDG--AEMVTMKHLEFAKDRILMGPERKSM-VIDEEAKK----ITA 561 (752)
T ss_pred CHHHHCCCCCCCCH-HH----HHHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHEEECCCCCCC-CCCHHHHH----HHH
T ss_conf 87672268898765-78----9988889999998637--4011088776544332115211334-46814544----344
Q ss_pred ECCCCCEE--------EEE-EEEEECCCCCEEECCCHHHHHHHHH
Q ss_conf 00016807--------999-9999748997244325689999999
Q gi|254780270|r 619 WTEVGGEI--------LTV-EGVIMPGKGEITITGNLKEIMKESI 654 (820)
Q Consensus 619 ~t~~GG~~--------l~I-E~~~~~g~g~l~lTG~lg~vmkES~ 654 (820)
T Consensus 562 yHE~GHAivA~yTk~A~PlhKaTImPRG~sLG~t~~LPe~D~~~~ 606 (752)
T KOG0734 562 YHEGGHAIVALYTKGAMPLHKATIMPRGPSLGHTSQLPEKDRYSI 606 (752)
T ss_pred HHCCCCEEEEEECCCCCCCCCEEECCCCCCCCCEEECCCCCHHHH
T ss_conf 332672588751278866430253257766663134686540457