HHsearch alignment for GI: 254780270 and conserved domain: KOG0735
>KOG0735 consensus.
Probab=98.71 E-value=3.7e-07 Score=73.01 Aligned_cols=227 Identities=15% Similarity=0.160 Sum_probs=119.2
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC----EEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCE-
Q ss_conf 244467359986056565027999999770882----499861888888883563200145671289999983278873-
Q gi|254780270|r 361 VIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQ----YVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNP- 435 (820)
Q Consensus 361 ~~~~~g~il~l~gppgvGKts~~~sia~al~r~----f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~np- 435 (820)
T Consensus 426 spv~~~~~Ill~G~~GsGKT~L~kal~~~~~k~~~~hv~~v~------Cs~l~~~~~e---~iQk~l~~vfse~~~~~PS 496 (952)
T KOG0735 426 SPVFRHGNILLNGPKGSGKTNLVKALFDYYSKDLIAHVEIVS------CSTLDGSSLE---KIQKFLNNVFSEALWYAPS 496 (952)
T ss_pred CCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEE------CHHCCCHHHH---HHHHHHHHHHHHHHHHCCC
T ss_conf 543346618986799877769999999875156506999975------2210420489---9999999999998863780
Q ss_pred EEEEECHHHHHH--HCCCCH---HHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCC-CCHHHCCC---EEEEE
Q ss_conf 999933155423--117711---5566554060016813320103523644279999348655-44131172---47998
Q gi|254780270|r 436 LLLLDEIDKMGS--DLRGDP---SAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLN-IPLPLMDR---MEIIR 506 (820)
Q Consensus 436 v~~ldeidk~~~--~~~gdp---~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~-i~~~l~dr---me~i~ 506 (820)
T Consensus 497 iIvLDdld~l~~~s~~e~~q~~~~~~rl-------a~flnqvi~~y~~~~~~ia~Iat~qe~qtl~~~L~s~~~Fq~~~~ 569 (952)
T KOG0735 497 IIVLDDLDCLASASSNENGQDGVVSERL-------AAFLNQVIKIYLKRNRKIAVIATGQELQTLNPLLVSPLLFQIVIA 569 (952)
T ss_pred EEEECCHHHHHCCCCCCCCCCHHHHHHH-------HHHHHHHHHHHHCCCCEEEEEEECHHHHHCCHHHCCCCCEEEEEE
T ss_conf 8997050354056844477302899999-------999999999987068579999851434203853347631478881
Q ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH---HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 25878689998999860898998625781313228999999---973177410234788879999898765421178520
Q gi|254780270|r 507 IAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLD---IIRLFTHEAGVRSFERALMKIARKAVTKIVKNSDTT 583 (820)
Q Consensus 507 ~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~---ii~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~~~~~ 583 (820)
T Consensus 570 L~ap~~~~R~~IL~~~~s~~~----------~~~~~~dLd~ls~~TEGy~----~~DL~ifVeRai~~a~leris~~--~ 633 (952)
T KOG0735 570 LPAPAVTRRKEILTTIFSKNL----------SDITMDDLDFLSVKTEGYL----ATDLVIFVERAIHEAFLERISNG--P 633 (952)
T ss_pred CCCCCHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHCCCCC----CHHHHHHHHHHHHHHHHHHHCCC--C
T ss_conf 589235679999999997553----------4545678998887607844----04479999999999998875167--6
Q ss_pred ECCCHHHHHHHHCCCCCCC---CCHHCCCCCCCCCEEEECCCCCE
Q ss_conf 1279678675305200033---20002233650000000001680
Q gi|254780270|r 584 VSINENNLQDYLGVPRYKY---GKIEGEDQVGIVTGLAWTEVGGE 625 (820)
Q Consensus 584 ~~i~~~~l~~~lg~~~~~~---~~~~~~~~~G~v~GLa~t~~GG~ 625 (820)
T Consensus 634 klltke~f~ksL~--~F~P~aLR~ik~----~k~tgi~w~digg~ 672 (952)
T KOG0735 634 KLLTKELFEKSLK--DFVPLALRGIKL----VKSTGIRWEDIGGL 672 (952)
T ss_pred CCCHHHHHHHHHH--HCCHHHHHHCCC----CCCCCCCCEECCCH
T ss_conf 3101889999987--407677640301----56678771003358