HHsearch alignment for GI: 254780270 and conserved domain: KOG0735
>KOG0735 consensus.
Probab=98.34 E-value=1.2e-05 Score=61.71 Aligned_cols=205 Identities=28% Similarity=0.412 Sum_probs=120.9
Q ss_pred HHHHCHHHHHHHHHHHHHHHHH-------CCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCC
Q ss_conf 6520116899999999999984-------244467359986056565027999999770882499861888888883563
Q gi|254780270|r 339 QDHFGLEKVKERIIEYLAVQMR-------VIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGH 411 (820)
Q Consensus 339 ~~hyGl~~vK~rile~lav~~~-------~~~~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh 411 (820)
T Consensus 667 ~digg~~~~k~~l~~~i~~P~kyp~if~~~plr~~~giLLyGppGcGKT~la~a~a~~~~~~f--isvKGP----ElL-- 738 (952)
T KOG0735 667 EDIGGLFEAKKVLEEVIEWPSKYPQIFANCPLRLRTGILLYGPPGCGKTLLASAIASNSNLRF--ISVKGP----ELL-- 738 (952)
T ss_pred EECCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCEEE--EEECCH----HHH--
T ss_conf 003358999999999985541036788608866655458877999857888888885378059--982588----999--
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCC-EEEEEECHHHHHH----HCCC--C-HHHHHHHHCCCCCCCCEEEEECCCCCCCCCE
Q ss_conf 20014567128999998327887-3999933155423----1177--1-1556655406001681332010352364427
Q gi|254780270|r 412 RRTYIGSMPGRIIQSLKRAKRSN-PLLLLDEIDKMGS----DLRG--D-PSAALLEVLDPAQNSSFVDHYLEVEYDLSDV 483 (820)
Q Consensus 412 ~~ty~ga~pg~ii~~l~~~~~~n-pv~~ldeidk~~~----~~~g--d-p~~allevldp~qn~~f~d~y~~~~~dls~v 483 (820)
T Consensus 739 -~KyIGaSEq~vR~lF~rA~~a~PCiLFFDEfdSiAPkRGhDsTGVTDRVVNQlLTelDG------------~Eg-l~GV 804 (952)
T KOG0735 739 -SKYIGASEQNVRDLFERAQSAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTELDG------------AEG-LDGV 804 (952)
T ss_pred -HHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC------------CCC-CCEE
T ss_conf -98745007889999998651497489712102437666877777429999999876036------------334-4538
Q ss_pred EEEEECCCC-C-CCHHH-----CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 999934865-5-44131-----1724799825878689998999860898998625781313228999999973177410
Q gi|254780270|r 484 MFIMTANTL-N-IPLPL-----MDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEA 556 (820)
Q Consensus 484 ~fi~tan~~-~-i~~~l-----~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~Ea 556 (820)
T Consensus 805 -~i~aaTsRpdliDpALLRpGRlD~~--v~C~~P~~~eRl~il~~------ls~s~~~~~~vdl--~~~a~~T~g~t--- 870 (952)
T KOG0735 805 -YILAATSRPDLIDPALLRPGRLDKL--VYCPLPDEPERLEILQV------LSNSLLKDTDVDL--ECLAQKTDGFT--- 870 (952)
T ss_pred -EEEEECCCCCCCCHHHCCCCCCCEE--EECCCCCCHHHHHHHHH------HHHCCCCCCCCCH--HHHHHHCCCCC---
T ss_conf -9997337834367766288765401--56799892899999999------8534577521016--88765217873---
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 234788879999898765421178
Q gi|254780270|r 557 GVRSFERALMKIARKAVTKIVKNS 580 (820)
Q Consensus 557 GvR~l~r~i~~i~r~~~~~~~~~~ 580 (820)
T Consensus 871 g-ADlq~ll~~A~l~avh~~l~~~ 893 (952)
T KOG0735 871 G-ADLQSLLYNAQLAAVHEILKRE 893 (952)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6-6599898777999999999863