HHsearch alignment for GI: 254780270 and conserved domain: KOG0740

>KOG0740 consensus.
Probab=98.88  E-value=3.3e-08  Score=81.02  Aligned_cols=203  Identities=23%  Similarity=0.332  Sum_probs=127.6

Q ss_pred             HHHHCHHHHHHHHHHHHHHHHHCC----CCCCCE--EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCC
Q ss_conf             652011689999999999998424----446735--99860565650279999997708824998618888888835632
Q gi|254780270|r  339 QDHFGLEKVKERIIEYLAVQMRVI----KNKGLI--LCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHR  412 (820)
Q Consensus       339 ~~hyGl~~vK~rile~lav~~~~~----~~~g~i--l~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~  412 (820)
T Consensus       153 ~di~gl~~~k~~l~e~vi~p~lr~d~F~glr~p~rglLLfGPpgtGKtmL~~aiAsE~~atff~iSas------sLts--  224 (428)
T KOG0740         153 DDIAGLEDAKQSLKEAVILPLLRPDLFLGLREPVRGLLLFGPPGTGKTMLAKAIATESGATFFNISAS------SLTS--  224 (428)
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHEECCCCCCHHHHHHHHHHHHCCEEEECCHH------HHHH--
T ss_conf             57740566899865423220455376523544531112005898844799999986206657630688------8653--


Q ss_pred             CCCCCCCCHHHHHHHHH-CCCCCE-EEEEECHHHHHHH--CCCCHHH--HHHHHCCCCCCCCEEEEEC-CCCCCCCCEEE
Q ss_conf             00145671289999983-278873-9999331554231--1771155--6655406001681332010-35236442799
Q gi|254780270|r  413 RTYIGSMPGRIIQSLKR-AKRSNP-LLLLDEIDKMGSD--LRGDPSA--ALLEVLDPAQNSSFVDHYL-EVEYDLSDVMF  485 (820)
Q Consensus       413 ~ty~ga~pg~ii~~l~~-~~~~np-v~~ldeidk~~~~--~~gdp~~--allevldp~qn~~f~d~y~-~~~~dls~v~f  485 (820)
T Consensus       225 -K~~Ge~-eK~vralf~vAr~~qPsvifidEidslls~Rs~~e~e~srr~ktefLiq~------~-~~~s~~~d--rvlv  293 (428)
T KOG0740         225 -KYVGES-EKLVRALFKVARSLQPSVIFIDEIDSLLSKRSDNEHESSRRLKTEFLLQF------D-GKNSAPDD--RVLV  293 (428)
T ss_pred             -HCCCHH-HHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHH------C-CCCCCCCC--EEEE
T ss_conf             -246707-78999999998713970898402567886368754544555655777654------0-44578887--0799


Q ss_pred             EEECCCC-CCCHHHCCC-EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             9934865-544131172-47998258786899989998608989986257813132289999999731774102347888
Q gi|254780270|r  486 IMTANTL-NIPLPLMDR-MEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFER  563 (820)
Q Consensus       486 i~tan~~-~i~~~l~dr-me~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r  563 (820)
T Consensus       294 igaTN~P~e~Dea~~Rrf~kr~yiplPd~et-----r~~~~~~ll~~~~~--~l~~~d~~~l~~~Tegysg--------s  358 (428)
T KOG0740         294 IGATNRPWELDEAARRRFVKRLYIPLPDYET-----RSLLWKQLLKEQPN--GLSDLDISLLAKVTEGYSG--------S  358 (428)
T ss_pred             EECCCCCHHHHHHHHHHHCCEEEECCCCHHH-----HHHHHHHHHHHCCC--CCCHHHHHHHHHHHCCCCC--------C
T ss_conf             8158883677888888710315535988789-----99999999976878--7417789999988617562--------2


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             799998987654
Q gi|254780270|r  564 ALMKIARKAVTK  575 (820)
Q Consensus       564 ~i~~i~r~~~~~  575 (820)
T Consensus       359 di~~l~kea~~~  370 (428)
T KOG0740         359 DITALCKEAAMG  370 (428)
T ss_pred             CHHHHHHHHHCC
T ss_conf             188998776238