HHsearch alignment for GI: 254780270 and conserved domain: KOG0741

Probab=97.33  E-value=0.0024  Score=44.10  Aligned_cols=85  Identities=28%  Similarity=0.477  Sum_probs=56.0

Q ss_pred             HHHHH--HHHHHHHCCCCCCC--EEEEECCCCCCHHHHHHHHHHHHCCCEEEEE----CCCCCCHHHHCCCCCCCCCCCC
Q ss_conf             99999--99999842444673--5998605656502799999977088249986----1888888883563200145671
Q gi|254780270|r  349 ERIIE--YLAVQMRVIKNKGL--ILCFVGPPGVGKTSLAQSIAKATGRQYVRMS----LGGVYDEADIRGHRRTYIGSMP  420 (820)
Q Consensus       349 ~rile--~lav~~~~~~~~g~--il~l~gppgvGKts~~~sia~al~r~f~~is----lgg~~d~~~i~gh~~ty~ga~p  420 (820)
T Consensus       517 ~~il~~G~llv~qvk~s~~s~lvSvLl~Gp~~sGKTaLAA~iA~~S~FPFvKiiSpe~miG~sEsaK------------c  584 (744)
T KOG0741         517 TRILDDGKLLVQQVKNSERSPLVSVLLEGPPGSGKTALAAKIALSSDFPFVKIISPEDMIGLSESAK------------C  584 (744)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECHHHHCCCCHHHH------------H
T ss_conf             7887668899998633466763589986699887688999997527998479737787037466788------------9


Q ss_pred             HHHHHHHHHC-CCCCEEEEEECHHHH
Q ss_conf             2899999832-788739999331554
Q gi|254780270|r  421 GRIIQSLKRA-KRSNPLLLLDEIDKM  445 (820)
Q Consensus       421 g~ii~~l~~~-~~~npv~~ldeidk~  445 (820)
T Consensus       585 ~~i~k~F~DAYkS~lsiivvDdiErL  610 (744)
T KOG0741         585 AHIKKIFEDAYKSPLSIIVVDDIERL  610 (744)
T ss_pred             HHHHHHHHHHHCCCCEEEEECCHHHH
T ss_conf             99999888763386508998155656