HHsearch alignment for GI: 254780270 and conserved domain: KOG0991
>KOG0991 consensus.
Probab=98.54 E-value=2.8e-07 Score=73.96 Aligned_cols=218 Identities=26% Similarity=0.352 Sum_probs=122.3
Q ss_pred HCCCCC-CCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH-CCC
Q ss_conf 404158-766322106889987766520116899999999999984244467359986056565027999999770-882
Q gi|254780270|r 316 LGVPWD-KKSKTKKNLDFAIRILDQDHFGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKAT-GRQ 393 (820)
Q Consensus 316 ~~lPW~-~~t~~~~dl~~a~~iLd~~hyGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al-~r~ 393 (820)
T Consensus 13 ~~l~wVeKYrP~~l----------~dIVGNe~tv~r----l~v--ia~~gnmP~liisGpPG~GKTTsi~~LAr~LLG~~ 76 (333)
T KOG0991 13 YQLPWVEKYRPSVL----------QDIVGNEDTVER----LSV--IAKEGNMPNLIISGPPGTGKTTSILCLARELLGDS 76 (333)
T ss_pred CCCHHHHHHCCHHH----------HHHHCCHHHHHH----HHH--HHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCHH
T ss_conf 11357886085299----------882177989999----999--99728998667527999861648999999983806
Q ss_pred EEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC-----EEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCC
Q ss_conf 49986188888888356320014567128999998327887-----3999933155423117711556655406001681
Q gi|254780270|r 394 YVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSN-----PLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSS 468 (820)
Q Consensus 394 f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~n-----pv~~ldeidk~~~~~~gdp~~allevldp~qn~~ 468 (820)
T Consensus 77 ~k-e~vLELN-ASdeRGID-----vVRn-~IK~FAQ~kv~lp~grhKIiILDEADSMT~gAQQ----AlRRtMEi----- 139 (333)
T KOG0991 77 YK-EAVLELN-ASDERGID-----VVRN-KIKMFAQKKVTLPPGRHKIIILDEADSMTAGAQQ----ALRRTMEI----- 139 (333)
T ss_pred HH-HHHHHCC-CCCCCCCH-----HHHH-HHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHH----HHHHHHHH-----
T ss_conf 66-5763205-76554608-----9999-9999987203489985248996152202068999----99999999-----
Q ss_pred EEEEECCCCCCCCCEEEEEECCCCC-CCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 3320103523644279999348655-441311724799825878689998999860898998625781313228999999
Q gi|254780270|r 469 FVDHYLEVEYDLSDVMFIMTANTLN-IPLPLMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLD 547 (820)
Q Consensus 469 f~d~y~~~~~dls~v~fi~tan~~~-i~~~l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ 547 (820)
T Consensus 140 ----------yS~ttRFalaCN~s~KIiEPIQSRCAiLRysklsd~---qi-----L~Rl~~v~--k~Ekv~yt~dgLea 199 (333)
T KOG0991 140 ----------YSNTTRFALACNQSEKIIEPIQSRCAILRYSKLSDQ---QI-----LKRLLEVA--KAEKVNYTDDGLEA 199 (333)
T ss_pred ----------HCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH---HH-----HHHHHHHH--HHHCCCCCCCHHHH
T ss_conf ----------706320000015421322267734576532226789---99-----99999999--87078877114778
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCC
Q ss_conf 9731774102347888799998987654211785201279678675305200
Q gi|254780270|r 548 IIRLFTHEAGVRSFERALMKIARKAVTKIVKNSDTTVSINENNLQDYLGVPR 599 (820)
Q Consensus 548 ii~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~~~lg~~~ 599 (820)
T Consensus 200 iif--ta~GDMRQalNnLQ---st~--------~g~g~Vn~enVfKv~d~Ph 238 (333)
T KOG0991 200 IIF--TAQGDMRQALNNLQ---STV--------NGFGLVNQENVFKVCDEPH 238 (333)
T ss_pred HHH--HCCCHHHHHHHHHH---HHH--------CCCCCCCHHHHHHCCCCCC
T ss_conf 554--41661999999999---874--------0545246323100069998