HHsearch alignment for GI: 254780270 and conserved domain: KOG1968

Probab=97.68  E-value=0.00018  Score=52.70  Aligned_cols=182  Identities=25%  Similarity=0.312  Sum_probs=104.2

Q ss_pred             HHHHHHCHHHHHHHHHHHHHHHHHCC---------CCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHH
Q ss_conf             76652011689999999999998424---------44673-599860565650279999997708824998618888888
Q gi|254780270|r  337 LDQDHFGLEKVKERIIEYLAVQMRVI---------KNKGL-ILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEA  406 (820)
Q Consensus       337 Ld~~hyGl~~vK~rile~lav~~~~~---------~~~g~-il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~  406 (820)
T Consensus       319 ~k~~~~~~~~~~-~~~~~l~~~k~~~~~sy~~~~~~ss~~~~~l~~G~pGigKT~~~h~~~k~~g~~v~E~Nas~~RSk~  397 (871)
T KOG1968         319 SKALEGNASSSK-KASKWLAKSKDKEKSSYKENEPDSSKKKALLLSGPPGIGKTTAAHKAAKELGFKVVEKNASDVRSKK  397 (871)
T ss_pred             HHHHHCCCCHHH-HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCC
T ss_conf             776633520366-6665887622133354002686156677887317887772056766301206540104754334422


Q ss_pred             HHCCCCCCCCCCCCHHHHHHHH-------HCCCCCEEEEEECHHHHHHHCCCCHH--HHHHHHCCCCCCCCEEEEECCCC
Q ss_conf             8356320014567128999998-------32788739999331554231177115--56655406001681332010352
Q gi|254780270|r  407 DIRGHRRTYIGSMPGRIIQSLK-------RAKRSNPLLLLDEIDKMGSDLRGDPS--AALLEVLDPAQNSSFVDHYLEVE  477 (820)
Q Consensus       407 ~i~gh~~ty~ga~pg~ii~~l~-------~~~~~npv~~ldeidk~~~~~~gdp~--~allevldp~qn~~f~d~y~~~~  477 (820)
T Consensus       398 ~l~~---~~~~~~~s~si~~~~~~~~~~~~~~~~~~vil~devD~~~~~dRg~v~~l~~l~~------------------  456 (871)
T KOG1968         398 ELLN---KLGNATSSHSIKGSKKKKGNRQSLNSDHFLILMDEVDGMFGEDRGGVSKLSSLCK------------------  456 (871)
T ss_pred             HHHH---HHHCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH------------------
T ss_conf             7776---6402446640001111113300046660699974255442000136999999998------------------


Q ss_pred             CCCCCEEEEEECCCCCCCHH-HCCCE-EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
Q ss_conf             36442799993486554413-11724-79982587868999899986089899862578131322899999997317
Q gi|254780270|r  478 YDLSDVMFIMTANTLNIPLP-LMDRM-EIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLF  552 (820)
Q Consensus       478 ~dls~v~fi~tan~~~i~~~-l~drm-e~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Y  552 (820)
T Consensus       457 --ks~~Piv~~cndr~~p~sr~~~~~~~~l~f~kP~~~--------~i~~ri~s--i~~se~~ki~~~~l~~~s~~~  521 (871)
T KOG1968         457 --KSSRPLVCTCNDRNLPKSRALSRACSDLRFSKPSSE--------LIRSRIMS--ICKSEGIKISDDVLEEISKLS  521 (871)
T ss_pred             --HCCCCEEEEECCCCCCCCCCHHHHCCEEEECCCCHH--------HHHHHHHH--HHCCCCEECCCHHHHHHHHHC
T ss_conf             --635776887337777665202232002340488577--------77766653--302464241727889998750