HHsearch alignment for GI: 254780270 and conserved domain: KOG1970
>KOG1970 consensus.
Probab=97.33 E-value=0.00089 Score=47.41 Aligned_cols=177 Identities=22% Similarity=0.267 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE-------CCCCCCHHHHCCCCCCCC
Q ss_conf 1689999999999998424446735998605656502799999977088249986-------188888888356320014
Q gi|254780270|r 344 LEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMS-------LGGVYDEADIRGHRRTYI 416 (820)
Q Consensus 344 l~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f~~is-------lgg~~d~~~i~gh~~ty~ 416 (820)
T Consensus 91 I~eVk~WL~---~~~~~~~~l~~~iLLltGPsGcGKSTtvkvLskelg~~~~Ew~Npi~~~~~~~~h~~t~~~~--~~~~ 165 (634)
T KOG1970 91 ISEVKQWLK---QVAEFTPKLGSRILLLTGPSGCGKSTTVKVLSKELGYQLIEWSNPINLKEPENLHNETSFLM--FPYQ 165 (634)
T ss_pred HHHHHHHHH---HHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHCC--CCHH
T ss_conf 899999999---99974536676079985798887131999999864802123047766566555455440013--3036
Q ss_pred CCCC------------HHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEE
Q ss_conf 5671------------2899999832788739999331554231177115566554060016813320103523644279
Q gi|254780270|r 417 GSMP------------GRIIQSLKRAKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVM 484 (820)
Q Consensus 417 ga~p------------g~ii~~l~~~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~ 484 (820)
T Consensus 166 s~L~~fesFler~~kyg~l~~~g~~~~~~~~liLveDLPn~~~~---d~~~~f~evL~---------~y~s--~g~~PlI 231 (634)
T KOG1970 166 SQLAVFESFLLRATKYGSLQMSGDDLRTDKKLILVEDLPNQFYR---DDSETFREVLR---------LYVS--IGRCPLI 231 (634)
T ss_pred HHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEEECCCHHHHH---HHHHHHHHHHH---------HHHH--CCCCCEE
T ss_conf 67899998999987623165313333467507985026144400---36999999999---------9984--5777679
Q ss_pred EEEEC-CC--CCCCHH-------HCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 99934-86--554413-------11724799825878689998999860898998625781313228999
Q gi|254780270|r 485 FIMTA-NT--LNIPLP-------LMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGV 544 (820)
Q Consensus 485 fi~ta-n~--~~i~~~-------l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~ 544 (820)
T Consensus 232 f~iTd~~~~g~nnq~rlf~~d~q~~~ri~~IsFNPIa~T----~MKK~L~-ric~~e~~~~s~~k~~~~~ 296 (634)
T KOG1970 232 FIITDSLSNGNNNQDRLFPKDIQEEPRISNISFNPIAPT----IMKKFLK-RICRIEANKKSGIKVPDTA 296 (634)
T ss_pred EEEECCCCCCCCCHHHHCHHHHHHCCCCCEEEECCCCHH----HHHHHHH-HHHHHHCCCCCCCCCCHHH
T ss_conf 998635357876343424265653358524761577679----9999999-9999862666667675067