HHsearch alignment for GI: 254780270 and conserved domain: PRK00411
>PRK00411 cdc6 cell division control protein 6; Reviewed.
Probab=99.45 E-value=8.7e-11 Score=100.50 Aligned_cols=222 Identities=20% Similarity=0.244 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC-----CEEEEECCCCCCHH--------HHCC
Q ss_conf 1689999999999998424446735998605656502799999977088-----24998618888888--------8356
Q gi|254780270|r 344 LEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGR-----QYVRMSLGGVYDEA--------DIRG 410 (820)
Q Consensus 344 l~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r-----~f~~islgg~~d~~--------~i~g 410 (820)
T Consensus 35 Re~Ei~~l~~~l~-~~l~g~~~~-n~~I~G~pGTGKT~~vk~v~~~l~~~~~~~~~vyINc~~~~t~~~i~~~i~~~L~~ 112 (394)
T PRK00411 35 REEQIEELAFALR-PALRGSRPS-NVLILGPPGTGKTTTVKKVFEELEEAALKVVYVYINCQIDRTRYAILSEIARSLFG 112 (394)
T ss_pred HHHHHHHHHHHHH-HHHCCCCCC-CEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 5999999999999-997599998-47998899998999999999999974689659999696689899999999999569
Q ss_pred CCCCCCCCCCHHHHHHHHHC---CCCCEEEEEECHHHHHHHCCCCHHHHHHHHCC-CCCCCCEEEEECCCCCCCCCEEEE
Q ss_conf 32001456712899999832---78873999933155423117711556655406-001681332010352364427999
Q gi|254780270|r 411 HRRTYIGSMPGRIIQSLKRA---KRSNPLLLLDEIDKMGSDLRGDPSAALLEVLD-PAQNSSFVDHYLEVEYDLSDVMFI 486 (820)
Q Consensus 411 h~~ty~ga~pg~ii~~l~~~---~~~npv~~ldeidk~~~~~~gdp~~allevld-p~qn~~f~d~y~~~~~dls~v~fi 486 (820)
T Consensus 113 ~~~p~~G~s~~~~~~~l~~~l~~~~~~~ivvLDEiD~L~~~~---~~~vLY~L~r~~~~------------~~~~~~~vI 177 (394)
T PRK00411 113 HPPPSSGLSFDELFDKIAEYLDERDRVLIVALDDINYLVEKE---GNDVLYSLLRAHEE------------YPGARIGVI 177 (394)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC---CCHHHHHHHHCCCC------------CCCCCEEEE
T ss_conf 989877878999999999986166975899996554020366---50899999854022------------688738999
Q ss_pred EECCCCC----CCHHHCCCE--EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHH
Q ss_conf 9348655----441311724--7998258786899989998608989986257813132289999999731774102347
Q gi|254780270|r 487 MTANTLN----IPLPLMDRM--EIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRS 560 (820)
Q Consensus 487 ~tan~~~----i~~~l~drm--e~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~ 560 (820)
T Consensus 178 ~IsN~~~~~~~Ldprv~S~l~~~~i~F~PY~~~qL~~IL~~R~------~~af~~g--v~~~~~i~~~A~~~a~~~G--D 247 (394)
T PRK00411 178 GISSDLTFLYILDPRVKSVFGPEEIVFPPYTADEIFDILKDRV------EEGFYPG--VVSDEVLELIADLTGREHG--D 247 (394)
T ss_pred EEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH------HHCCCCC--CCCHHHHHHHHHHHHHCCC--C
T ss_conf 9976871776640777502786289858999899999999999------8414556--7897899999999855047--5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHH
Q ss_conf 88879999898765421178520127967867530
Q gi|254780270|r 561 FERALMKIARKAVTKIVKNSDTTVSINENNLQDYL 595 (820)
Q Consensus 561 l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~~~l 595 (820)
T Consensus 248 aR~Ald-llr~A~-e~Ae~~g~-~~Vt~~hV~~A~ 279 (394)
T PRK00411 248 ARVAID-LLRRAG-EIAEREGS-RKVTEEDVRKAY 279 (394)
T ss_pred HHHHHH-HHHHHH-HHHHHHCC-CCCCHHHHHHHH
T ss_conf 899999-999999-99997189-965899999999