HHsearch alignment for GI: 254780270 and conserved domain: PRK04837
>PRK04837 ATP-dependent RNA helicase RhlB; Provisional.
Probab=94.38 E-value=0.33 Score=28.00 Aligned_cols=56 Identities=21% Similarity=0.312 Sum_probs=33.1
Q ss_pred EECCCCCCHHHHCCC--CCCCCCCCCHHHHHHHHHCC--CCC-EEEEEECHHHHHH-HCCCC
Q ss_conf 861888888883563--20014567128999998327--887-3999933155423-11771
Q gi|254780270|r 397 MSLGGVYDEADIRGH--RRTYIGSMPGRIIQSLKRAK--RSN-PLLLLDEIDKMGS-DLRGD 452 (820)
Q Consensus 397 islgg~~d~~~i~gh--~~ty~ga~pg~ii~~l~~~~--~~n-pv~~ldeidk~~~-~~~gd 452 (820)
T Consensus 117 ~~~GG~~~~~q~~~l~~~~dIlV~TPgRL~d~~~~~~~~l~~i~~lVlDEAD~lld~gF~~~ 178 (423)
T PRK04837 117 LAYGGEGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMFDLGFIKD 178 (423)
T ss_pred EEECCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHCCCHHH
T ss_conf 99899887999998717999899891899999864221236642899634465430263999