HHsearch alignment for GI: 254780270 and conserved domain: PRK04837

>PRK04837 ATP-dependent RNA helicase RhlB; Provisional.
Probab=94.38  E-value=0.33  Score=28.00  Aligned_cols=56  Identities=21%  Similarity=0.312  Sum_probs=33.1

Q ss_pred             EECCCCCCHHHHCCC--CCCCCCCCCHHHHHHHHHCC--CCC-EEEEEECHHHHHH-HCCCC
Q ss_conf             861888888883563--20014567128999998327--887-3999933155423-11771
Q gi|254780270|r  397 MSLGGVYDEADIRGH--RRTYIGSMPGRIIQSLKRAK--RSN-PLLLLDEIDKMGS-DLRGD  452 (820)
Q Consensus       397 islgg~~d~~~i~gh--~~ty~ga~pg~ii~~l~~~~--~~n-pv~~ldeidk~~~-~~~gd  452 (820)
T Consensus       117 ~~~GG~~~~~q~~~l~~~~dIlV~TPgRL~d~~~~~~~~l~~i~~lVlDEAD~lld~gF~~~  178 (423)
T PRK04837        117 LAYGGEGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMFDLGFIKD  178 (423)
T ss_pred             EEECCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHCCCHHH
T ss_conf             99899887999998717999899891899999864221236642899634465430263999