HHsearch alignment for GI: 254780270 and conserved domain: PRK05748
>PRK05748 replicative DNA helicase; Provisional.
Probab=94.73 E-value=0.37 Score=27.57 Aligned_cols=41 Identities=29% Similarity=0.311 Sum_probs=31.1
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHH--H--HCCCEEEEECCC
Q ss_conf 2444673599860565650279999997--7--088249986188
Q gi|254780270|r 361 VIKNKGLILCFVGPPGVGKTSLAQSIAK--A--TGRQYVRMSLGG 401 (820)
Q Consensus 361 ~~~~~g~il~l~gppgvGKts~~~sia~--a--l~r~f~~islgg 401 (820)
T Consensus 198 ~G~~~g~LiviaaRP~mGKTa~alnia~~~a~~~~~~v~~fSlEM 242 (448)
T PRK05748 198 SGLQPNDLIIVAARPSVGKTAFALNIAQNVATKTDKNVAIFSLEM 242 (448)
T ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 798867379998479987689999999999985698089981778