HHsearch alignment for GI: 254780270 and conserved domain: PRK06305
>PRK06305 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.36 E-value=1.9e-11 Score=105.55 Aligned_cols=211 Identities=23% Similarity=0.333 Sum_probs=141.8
Q ss_pred HHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCE--------------EEEECCCCCCH
Q ss_conf 5201168999999999999842444673599860565650279999997708824--------------99861888888
Q gi|254780270|r 340 DHFGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQY--------------VRMSLGGVYDE 405 (820)
Q Consensus 340 ~hyGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f--------------~~islgg~~d~ 405 (820)
T Consensus 18 dvVGQ~~vv~~L~nai-----~~~ri~HAyLF~GprGtGKTT~ArilAkaLnC~~~~~~~~pCg~C~~C~~I~~g~~~DV 92 (462)
T PRK06305 18 EILGQDAVVTVLKNAL-----RFNRAAHAYLFSGIRGTGKTTLARIFAKALNCQNPTEDQEPCNQCAICKEISSGTSLDV 92 (462)
T ss_pred HHCCCHHHHHHHHHHH-----HCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCE
T ss_conf 6049099999999999-----84997623430389985999999999999679999888898876688899863899986
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHH--CCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCC-CCCCCCEEEEECCCCCCCCC
Q ss_conf 883563200145671289999983--278873999933155423117711556655406-00168133201035236442
Q gi|254780270|r 406 ADIRGHRRTYIGSMPGRIIQSLKR--AKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLD-PAQNSSFVDHYLEVEYDLSD 482 (820)
Q Consensus 406 ~~i~gh~~ty~ga~pg~ii~~l~~--~~~~npv~~ldeidk~~~~~~gdp~~allevld-p~qn~~f~d~y~~~~~dls~ 482 (820)
T Consensus 93 iEiDaAs~~gVddIR-el~e~v~~~P~~~~yKVyIIDEvhmLs~~----AfNALLKtLEEPP----------------~~ 151 (462)
T PRK06305 93 IEIDGASHRGIEDIR-QINETVLFTPSKSQYKIYIIDEVHMLTKE----AFNSLLKTLEEPP----------------QH 151 (462)
T ss_pred EEECCCCCCCHHHHH-HHHHHHCCCCCCCCEEEEEEECHHHCCHH----HHHHHHHHHHCCC----------------CC
T ss_conf 864355344668999-99977100886775059998152117999----9999999861898----------------77
Q ss_pred EEEEEECCCCC-CCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHH
Q ss_conf 79999348655-44131172479982587868999899986089899862578131322899999997317741023478
Q gi|254780270|r 483 VMFIMTANTLN-IPLPLMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSF 561 (820)
Q Consensus 483 v~fi~tan~~~-i~~~l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l 561 (820)
T Consensus 152 v~FILaTTe~~KIp~TIlSRCQrf~F~~i~~~~I~~---------~L~~I-~~~E~i~~e~~AL~lIA~~--a~GsmRDA 219 (462)
T PRK06305 152 VKFFLATTEIHKIPGTILSRCQKMHLKRIPEETIID---------KLALI-AQQDGIETSREALLPIARA--AQGSLRDA 219 (462)
T ss_pred EEEEEEECCHHHCCHHHHHHHHEEECCCCCHHHHHH---------HHHHH-HHHCCCCCCHHHHHHHHHH--CCCCHHHH
T ss_conf 499998188142854787654023325799999999---------99999-9983998599999999998--58958789
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCC
Q ss_conf 8879999898765421178520127967867530520
Q gi|254780270|r 562 ERALMKIARKAVTKIVKNSDTTVSINENNLQDYLGVP 598 (820)
Q Consensus 562 ~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~~~lg~~ 598 (820)
T Consensus 220 lslLDQ~i~-----~~-----~~~it~~~V~~~lG~v 246 (462)
T PRK06305 220 ESLYDYVVG-----LF-----PKSLSPDTVAKALGLL 246 (462)
T ss_pred HHHHHHHHH-----HC-----CCCCCHHHHHHHHCCC
T ss_conf 999999998-----47-----9986899999986899