HHsearch alignment for GI: 254780270 and conserved domain: PRK06921

Probab=96.97  E-value=0.0016  Score=45.59  Aligned_cols=89  Identities=18%  Similarity=0.268  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHC-C---CEEEEECCCCCCHHHHCCCCCCCCCCCC
Q ss_conf             68999999999999842444673599860565650279999997708-8---2499861888888883563200145671
Q gi|254780270|r  345 EKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATG-R---QYVRMSLGGVYDEADIRGHRRTYIGSMP  420 (820)
Q Consensus       345 ~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~-r---~f~~islgg~~d~~~i~gh~~ty~ga~p  420 (820)
T Consensus        95 k~a~~~a~eY~~~F~~i~~~~~~~l~f~G~~G~GKThLa~aIa~~Ll~~~~~~Vly~~~~~~--~~~lk---~~~~~--~  167 (265)
T PRK06921         95 KDAYECAVEYVKDFEKIQGCRKNSIALLGQPGSGKTHLLTAAANELMRKKGVPVLYFPFVEG--FGDLK---DDFDL--L  167 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHH--HHHHH---HHHHH--H
T ss_conf             99999999999977876077766279972898988999999999999962971999887999--99999---88888--9


Q ss_pred             HHHHHHHHHCCCCCEEEEEECHHH
Q ss_conf             289999983278873999933155
Q gi|254780270|r  421 GRIIQSLKRAKRSNPLLLLDEIDK  444 (820)
Q Consensus       421 g~ii~~l~~~~~~npv~~ldeidk  444 (820)
T Consensus       168 ~~~l~~~~~----~dlLIIDDLfk  187 (265)
T PRK06921        168 EAKLNRMKK----VEVLFIDDLFK  187 (265)
T ss_pred             HHHHHHHHC----CCEEEEECCCC
T ss_conf             999998632----99999822122