HHsearch alignment for GI: 254780270 and conserved domain: PRK06995

Probab=97.71  E-value=0.0003  Score=50.99  Aligned_cols=81  Identities=23%  Similarity=0.363  Sum_probs=42.7

Q ss_pred             CCCEEEEECCCCCCHHHH-HHHHHHH-H--CC-CEEEEECCCCCCHH--------HHCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf             673599860565650279-9999977-0--88-24998618888888--------8356320014567128999998327
Q gi|254780270|r  365 KGLILCFVGPPGVGKTSL-AQSIAKA-T--GR-QYVRMSLGGVYDEA--------DIRGHRRTYIGSMPGRIIQSLKRAK  431 (820)
Q Consensus       365 ~g~il~l~gppgvGKts~-~~sia~a-l--~r-~f~~islgg~~d~~--------~i~gh~~ty~ga~pg~ii~~l~~~~  431 (820)
T Consensus       175 ~ggV~alVGPTGVGKTTTiAKLAAr~~l~~g~~kVaLIT~DTYRIgAvEQLktYa~Ilgv-Pv~vv~~~~eL~~aL~~l~  253 (404)
T PRK06995        175 RGGVFALVGPTGVGKTTTTAKLAARCVMRHGASKVALLTTDSYRIGGHEQLRIYGKILGV-PVHAVKDAADLRLALAELR  253 (404)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCC-EEEEECCHHHHHHHHHHHC
T ss_conf             475589866888763758999999999983898379997687547899999999987595-5999599999999999708


Q ss_pred             CCCEEEEEECHHHHHHHCC
Q ss_conf             8873999933155423117
Q gi|254780270|r  432 RSNPLLLLDEIDKMGSDLR  450 (820)
Q Consensus       432 ~~npv~~ldeidk~~~~~~  450 (820)
T Consensus       254 ~~-dlILIDT---aGrs~r  268 (404)
T PRK06995        254 NK-HIVLIDT---VGMSQR  268 (404)
T ss_pred             CC-CEEEEEC---CCCCCC
T ss_conf             99-9999809---998976