HHsearch alignment for GI: 254780270 and conserved domain: PRK07261
>PRK07261 topology modulation protein; Provisional.
Probab=96.28 E-value=0.0051 Score=41.71 Aligned_cols=29 Identities=21% Similarity=0.449 Sum_probs=26.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEE
Q ss_conf 99860565650279999997708824998
Q gi|254780270|r 369 LCFVGPPGVGKTSLAQSIAKATGRQYVRM 397 (820)
Q Consensus 369 l~l~gppgvGKts~~~sia~al~r~f~~i 397 (820)
T Consensus 3 I~IiG~sGsGKSTlAr~L~~~~~ip~~~L 31 (171)
T PRK07261 3 IAIIGYSGSGKSTLARFLGQHYNCPVLHL 31 (171)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEE
T ss_conf 99988999868999999999879797970