HHsearch alignment for GI: 254780270 and conserved domain: PRK07399

>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=98.62  E-value=1.8e-06  Score=67.79  Aligned_cols=161  Identities=20%  Similarity=0.256  Sum_probs=100.3

Q ss_pred             HHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-------EEEEECCCCC--------
Q ss_conf             6520116899999999999984244467359986056565027999999770882-------4998618888--------
Q gi|254780270|r  339 QDHFGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQ-------YVRMSLGGVY--------  403 (820)
Q Consensus       339 ~~hyGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~-------f~~islgg~~--------  403 (820)
T Consensus         4 ~~iiGq~~~~~~L~~ai-----~~~rl~hAyLF~Gp~G~GK~~~A~~fa~~Ll~~~~~~~~~~~ri~~~nHPDl~~i~P~   78 (314)
T PRK07399          4 ANLIGQPLAIELLTAAI-----EQNRIAPAYLFAGPEGVGRKLAALRFIEGLLSQGSPSKNIRRRLEEGNHPDLLWVEPT   78 (314)
T ss_pred             CCCCCCHHHHHHHHHHH-----HCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEECC
T ss_conf             31259499999999999-----8599674487789998329999999999985789999766558751899977886056


Q ss_pred             ----------CHHHHCCCCCCCCCCCCHHHHHHHHH------CCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCC
Q ss_conf             ----------88883563200145671289999983------27887399993315542311771155665540600168
Q gi|254780270|r  404 ----------DEADIRGHRRTYIGSMPGRIIQSLKR------AKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNS  467 (820)
Q Consensus       404 ----------d~~~i~gh~~ty~ga~pg~ii~~l~~------~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~  467 (820)
T Consensus        79 ~~~~g~~~~~~~~~~~~~~~~~~~~I~idqIR~l~~~l~~~p~~~~~kVvII~~ae~m~~~----AaNaLLKtLE-----  149 (314)
T PRK07399         79 YQHQGKLITASEAEEAGLKRKSPPQIRLEQIREIKRFLSRPPLEAPRKVVVIEDAETMNEA----AANALLKTLE-----  149 (314)
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCHH----HHHHHHHHHC-----
T ss_conf             2003454557789876530268777879999999999731885688479998897871999----9999998614-----


Q ss_pred             CEEEEECCCCCCCCCEEEEEECCCCC-CCHHHCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf             13320103523644279999348655-4413117247998258786899989998608
Q gi|254780270|r  468 SFVDHYLEVEYDLSDVMFIMTANTLN-IPLPLMDRMEIIRIAGYTEEEKLQIAKNHLV  524 (820)
Q Consensus       468 ~f~d~y~~~~~dls~v~fi~tan~~~-i~~~l~drme~i~~~~y~~~ek~~i~~~~l~  524 (820)
T Consensus       150 --------EP---~~~~fILit~~~~~lLpTI~SRCQ~i~F~~l~~~~i~~~L~~~~~  196 (314)
T PRK07399        150 --------EP---GNGTLILIAPSPESLLPTIVSRCQIIPFYRLSDEQLEQVLKRLGD  196 (314)
T ss_pred             --------CC---CCCEEEEEECCHHHCCHHHHCCCEEEECCCCCHHHHHHHHHHCCC
T ss_conf             --------78---785699997993649146641875633899899999999997166