HHsearch alignment for GI: 254780270 and conserved domain: PRK07764
>PRK07764 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.02 E-value=9e-09 Score=85.25 Aligned_cols=188 Identities=21% Similarity=0.285 Sum_probs=122.5
Q ss_pred HHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-------------EEEEECCC--CCC
Q ss_conf 520116899999999999984244467359986056565027999999770882-------------49986188--888
Q gi|254780270|r 340 DHFGLEKVKERIIEYLAVQMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQ-------------YVRMSLGG--VYD 404 (820)
Q Consensus 340 ~hyGl~~vK~rile~lav~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~-------------f~~islgg--~~d 404 (820)
T Consensus 16 eviGQe~v~~~L~~Ai-----~~gri~HAYLFsGprG~GKTt~ARilAkaLNC~~~~~~~PCg~C~sC~~i~~g~~~~~D 90 (775)
T PRK07764 16 EVVGQEHVTEPLSTAL-----DSGRINHAYLFSGPRGCGKTSSARILARSLNCAQGPTSTPCGVCDSCVALAPGGPGSLD 90 (775)
T ss_pred HHCCCHHHHHHHHHHH-----HCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
T ss_conf 6228599999999999-----81997633762378887888999999999668999998988887637888638988886
Q ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHC------CCCCEEEEEECHHHHHHHCCCCHHHHHHHHCC-CCCCCCEEEEECCCC
Q ss_conf 88835632001456712899999832------78873999933155423117711556655406-001681332010352
Q gi|254780270|r 405 EADIRGHRRTYIGSMPGRIIQSLKRA------KRSNPLLLLDEIDKMGSDLRGDPSAALLEVLD-PAQNSSFVDHYLEVE 477 (820)
Q Consensus 405 ~~~i~gh~~ty~ga~pg~ii~~l~~~------~~~npv~~ldeidk~~~~~~gdp~~allevld-p~qn~~f~d~y~~~~ 477 (820)
T Consensus 91 viEiDAAS~~gVdd-----iReL~e~~~y~P~~~ryKVyIIDEaHmls~~a----fNALLKtLEEPP------------- 148 (775)
T PRK07764 91 VVEIDAASHGGVDD-----ARELRERAFFAPAQSRYRIFIIDEAHMVTTAG----FNALLKIVEEPP------------- 148 (775)
T ss_pred EEEECCCCCCCHHH-----HHHHHHHCCCCCCCCCEEEEEEECHHHHCHHH----HHHHHHHHCCCC-------------
T ss_conf 68731565568899-----99999854768767863599985354407999----999988622786-------------
Q ss_pred CCCCCEEEEEECCCCC-CCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 3644279999348655-441311724799825878689998999860898998625781313228999999973177410
Q gi|254780270|r 478 YDLSDVMFIMTANTLN-IPLPLMDRMEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEA 556 (820)
Q Consensus 478 ~dls~v~fi~tan~~~-i~~~l~drme~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~Ea 556 (820)
T Consensus 149 ---~hvvFIlaTTep~kip~TI~SRcq~f~Fr~i~~~~~~~----~-l~~i~-----~~E~i~~~~~al~li~r~--~~G 213 (775)
T PRK07764 149 ---EHLIFIFATTEPEKVIGTIRSRTHHYPFRLVPPGTMRP----Y-LERIC-----AQEGVVVDDAVLPLVIRA--GGG 213 (775)
T ss_pred ---CCEEEEEECCCHHHCCHHHHHHCCCCCCCCCCHHHHHH----H-HHHHH-----HHCCCCCCHHHHHHHHHH--CCC
T ss_conf ---46279995487354716776410234526699999999----9-99999-----983998798999999998--289
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 2347888799998
Q gi|254780270|r 557 GVRSFERALMKIA 569 (820)
Q Consensus 557 GvR~l~r~i~~i~ 569 (820)
T Consensus 214 s~RDalS~ldQl~ 226 (775)
T PRK07764 214 SPRDTLSVLDQLL 226 (775)
T ss_pred CHHHHHHHHHHHH
T ss_conf 6676899999998