HHsearch alignment for GI: 254780270 and conserved domain: PRK08058

>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=98.57  E-value=2.9e-07  Score=73.79  Aligned_cols=133  Identities=20%  Similarity=0.279  Sum_probs=86.5

Q ss_pred             HHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEE--EEECCCCCCHHHHCCCCCCCCCCCC--------H---HH--
Q ss_conf             8424446735998605656502799999977088249--9861888888883563200145671--------2---89--
Q gi|254780270|r  359 MRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYV--RMSLGGVYDEADIRGHRRTYIGSMP--------G---RI--  423 (820)
Q Consensus       359 ~~~~~~~g~il~l~gppgvGKts~~~sia~al~r~f~--~islgg~~d~~~i~gh~~ty~ga~p--------g---~i--  423 (820)
T Consensus        21 ~i~~~rl~HA~Lf~Gp~G~GK~~~A~~~A~~LlC~~~~~~~~Cg~C~~------C~~~~~~~HPD~~~i~p~~~~i~idq   94 (329)
T PRK08058         21 SIAKNRLAHAYLFEGAKGTGKKATALWLAKSLFCLERNGVEPCGTCTN------CKRIESGNHPDVHLVAPDGQSIKKDQ   94 (329)
T ss_pred             HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH------HHHHHCCCCCCEEEECCCCCCCCHHH
T ss_conf             998599661565578999889999999999973999999998878889------99987699997677456614077999


Q ss_pred             HHHHHHC------CCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCC-CCH
Q ss_conf             9999832------788739999331554231177115566554060016813320103523644279999348655-441
Q gi|254780270|r  424 IQSLKRA------KRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLN-IPL  496 (820)
Q Consensus       424 i~~l~~~------~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~-i~~  496 (820)
T Consensus        95 iR~L~~~~~~~p~~g~~KV~II~~Ae~m~~~----AaNALLKtLE-------------EPp--~~t~fIL~t~~~~~lLp  155 (329)
T PRK08058         95 IRYLKEEFSKSGVESNKKVYIIEHADKMTAS----AANSLLKFLE-------------EPS--GDTTAILLTENKHQILP  155 (329)
T ss_pred             HHHHHHHHCCCCCCCCCEEEEEECHHHHCHH----HHHHHHHHHH-------------CCC--CCCEEEEEECCHHHHHH
T ss_conf             9999999643875788679997347762999----9999999864-------------689--78679987299666436


Q ss_pred             HHCCCEEEEEECCCCHHHHH
Q ss_conf             31172479982587868999
Q gi|254780270|r  497 PLMDRMEIIRIAGYTEEEKL  516 (820)
Q Consensus       497 ~l~drme~i~~~~y~~~ek~  516 (820)
T Consensus       156 TI~SRCq~i~f~~~~~~~i~  175 (329)
T PRK08058        156 TILSRCQVVEFRPLPPESLI  175 (329)
T ss_pred             HHHHCCEEEECCCCCHHHHH
T ss_conf             88631425658899999999