HHsearch alignment for GI: 254780270 and conserved domain: PRK08118

>PRK08118 topology modulation protein; Reviewed.

Probab=96.18  E-value=0.0057  Score=41.32  Aligned_cols=29  Identities=21%  Similarity=0.456  Sum_probs=26.2

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCEEEE
Q ss_conf             99860565650279999997708824998
Q gi|254780270|r  369 LCFVGPPGVGKTSLAQSIAKATGRQYVRM  397 (820)
Q Consensus       369 l~l~gppgvGKts~~~sia~al~r~f~~i  397 (820)
T Consensus         4 I~IiG~~GsGKSTlAr~L~~~~~ip~~~L   32 (167)
T PRK08118          4 IILIGSGGSGKSTLARQLGEKLNIPVHHL   32 (167)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCEEEC
T ss_conf             99988999879999999999889697964