HHsearch alignment for GI: 254780270 and conserved domain: PRK08853

Probab=98.94  E-value=2.2e-08  Score=82.24  Aligned_cols=173  Identities=19%  Similarity=0.249  Sum_probs=118.6

Q ss_pred             HHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC-------------CEEEEECCCCCCHHHHCCCCCCCCCCCCHHHH
Q ss_conf             98424446735998605656502799999977088-------------24998618888888835632001456712899
Q gi|254780270|r  358 QMRVIKNKGLILCFVGPPGVGKTSLAQSIAKATGR-------------QYVRMSLGGVYDEADIRGHRRTYIGSMPGRII  424 (820)
Q Consensus       358 ~~~~~~~~g~il~l~gppgvGKts~~~sia~al~r-------------~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii  424 (820)
T Consensus        30 nal~~~rl~haylf~G~rGvGKTt~ARi~Ak~lNC~~~~~~~pcg~C~~C~~i~~g~~~d~~EiDaAs~~~vdd~re-l~  108 (717)
T PRK08853         30 NALAHNRLHHAYLFSGTRGVGKTTIGRLFAKGLNCETGITSTPCGQCATCKEIDEGRFVDLLEIDAASRTKVEDTRE-LL  108 (717)
T ss_pred             HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHH-HH
T ss_conf             99970997405761088988898999999998678999999978887026767447877524540565678899999-99


Q ss_pred             HHHHH--CCCCCEEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCC-CCHHHCCC
Q ss_conf             99983--2788739999331554231177115566554060016813320103523644279999348655-44131172
Q gi|254780270|r  425 QSLKR--AKRSNPLLLLDEIDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANTLN-IPLPLMDR  501 (820)
Q Consensus       425 ~~l~~--~~~~npv~~ldeidk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~~~-i~~~l~dr  501 (820)
T Consensus       109 ~~~~y~p~~~~yKvyiiDEvHmls~~a----fnAlLKtlE-------------EPP--~hv~FilaTT~~~kip~TilSR  169 (717)
T PRK08853        109 DNVQYKPARGRFKVYLIDEVHMLSRHS----FNALLKTLE-------------EPP--EYVKFLLATTDPQKLPVTILSR  169 (717)
T ss_pred             HHCCCCCCCCCEEEEEEECHHHCCHHH----HHHHHHHHC-------------CCC--CCEEEEEECCCHHHCCHHHHHH
T ss_conf             855548877854799983054438999----999987603-------------787--5648998438734373889876


Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
Q ss_conf             4799825878689998999860898998625781313228999999973177410234788
Q gi|254780270|r  502 MEIIRIAGYTEEEKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFE  562 (820)
Q Consensus       502 me~i~~~~y~~~ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~  562 (820)
T Consensus       170 c~~f~l~~~~~~~i~~---------~l~~i-~~~E~i~~~~~al~~ia~~--a~Gs~Rdal  218 (717)
T PRK08853        170 CLQFHLKPISVDQIHQ---------QLDFV-LDKEQVSAEARALGLIAHA--ADGSMRDAL  218 (717)
T ss_pred             HHHCCCCCCCHHHHHH---------HHHHH-HHHCCCCCCHHHHHHHHHH--CCCCHHHHH
T ss_conf             5442326899999999---------99999-9975987699999999997--688377888