HHsearch alignment for GI: 254780270 and conserved domain: PRK09087
>PRK09087 hypothetical protein; Validated.
Probab=98.22 E-value=0.00012 Score=54.10 Aligned_cols=173 Identities=17% Similarity=0.278 Sum_probs=104.2
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 44467359986056565027999999770882499861888888883563200145671289999983278873999933
Q gi|254780270|r 362 IKNKGLILCFVGPPGVGKTSLAQSIAKATGRQYVRMSLGGVYDEADIRGHRRTYIGSMPGRIIQSLKRAKRSNPLLLLDE 441 (820)
Q Consensus 362 ~~~~g~il~l~gppgvGKts~~~sia~al~r~f~~islgg~~d~~~i~gh~~ty~ga~pg~ii~~l~~~~~~npv~~lde 441 (820)
T Consensus 40 ~~w~~~~~~L~Gp~gsGKTHL~~~~~~~~~a~~~--~------~~~~-----------~~~~~~~-----~~~~~~~idd 95 (226)
T PRK09087 40 PNWPSPVVVLAGPVGSGKTHLASIWREKADALLV--H------PNEI-----------GSDAANA-----AAERPVLIED 95 (226)
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEE--C------HHHC-----------CHHHHHH-----HCCCCEEEEC
T ss_conf 2677775899899999886999999998099683--6------6874-----------7466765-----3279889974
Q ss_pred HHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEECCC----CCCCHH-HCCC---EEEEEECCCCHH
Q ss_conf 15542311771155665540600168133201035236442799993486----554413-1172---479982587868
Q gi|254780270|r 442 IDKMGSDLRGDPSAALLEVLDPAQNSSFVDHYLEVEYDLSDVMFIMTANT----LNIPLP-LMDR---MEIIRIAGYTEE 513 (820)
Q Consensus 442 idk~~~~~~gdp~~allevldp~qn~~f~d~y~~~~~dls~v~fi~tan~----~~i~~~-l~dr---me~i~~~~y~~~ 513 (820)
T Consensus 96 ~d~~~~d-----Ee~LFhl~N~~~~--------------~~~~LLlts~~~p~~l~~~L~DL~SRL~~~~~~~I~~pdD~ 156 (226)
T PRK09087 96 IDAGGFD-----ETGLFHLINSVRQ--------------AGTSLLMTSRLWPSAWNVKLPDLKSRLKAATVVEIGEPDDA 156 (226)
T ss_pred CCCCCCC-----HHHHHHHHHHHHH--------------CCCEEEEECCCCHHHCCCCCHHHHHHHHCCEEEEECCCCHH
T ss_conf 8777747-----8999999999985--------------39879998898956667624689999857857983599989
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHH
Q ss_conf 99989998608989986257813132289999999731774102347888799998987654211785201279678675
Q gi|254780270|r 514 EKLQIAKNHLVKKVLTEHALKQEECCISDGVLLDIIRLFTHEAGVRSFERALMKIARKAVTKIVKNSDTTVSINENNLQD 593 (820)
Q Consensus 514 ek~~i~~~~l~p~~~~~~~~~~~~~~~~~~~i~~ii~~Yt~EaGvR~l~r~i~~i~r~~~~~~~~~~~~~~~i~~~~l~~ 593 (820)
T Consensus 157 ll~~~L~k~----------~~~r~l~l~~~v~~yll~r~~Rs--~~~l~~~l~~LD~~SL~-------~kr~ITiplike 217 (226)
T PRK09087 157 LLSGVIFKL----------FADRQLYVEPHVVYYLVSRMERS--LFAAQTIVERLDRLALE-------RKSRITRALAAE 217 (226)
T ss_pred HHHHHHHHH----------HHHCCCCCCHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHH-------CCCCCCHHHHHH
T ss_conf 999999999----------87576578888999999845889--99999999999999998-------189998999999
Q ss_pred HHC
Q ss_conf 305
Q gi|254780270|r 594 YLG 596 (820)
Q Consensus 594 ~lg 596 (820)
T Consensus 218 vL~ 220 (226)
T PRK09087 218 VLN 220 (226)
T ss_pred HHH
T ss_conf 998