HHsearch alignment for GI: 254780270 and conserved domain: PRK09302

>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=95.16  E-value=0.039  Score=34.96  Aligned_cols=47  Identities=28%  Similarity=0.277  Sum_probs=34.7

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHH----HHHHCCCEEEEECCCCCCHHHHCCC
Q ss_conf             446735998605656502799999----9770882499861888888883563
Q gi|254780270|r  363 KNKGLILCFVGPPGVGKTSLAQSI----AKATGRQYVRMSLGGVYDEADIRGH  411 (820)
Q Consensus       363 ~~~g~il~l~gppgvGKts~~~si----a~al~r~f~~islgg~~d~~~i~gh  411 (820)
T Consensus        21 lp~g~~~LV~G~pGsGKTtla~QfL~~Ga~~~GE~~lyitl~E~--~~~l~~~   71 (501)
T PRK09302         21 LPKGRPTLVSGTAGTGKTLFALQFLHNGIKSFGEPGVFVTFEES--PEDIIRN   71 (501)
T ss_pred             CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC--HHHHHHH
T ss_conf             88997799983899999999999999998855997899985799--9999999