HHsearch alignment for GI: 254780270 and conserved domain: PRK09862
>PRK09862 putative ATP-dependent protease; Provisional.
Probab=98.47 E-value=3.2e-06 Score=65.88 Aligned_cols=162 Identities=23% Similarity=0.308 Sum_probs=133.5
Q ss_pred CCCCEEEECCCCCEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEECCCCCCCC
Q ss_conf 50000000001680799999997489972443256899999999999999998886299855742078147448888478
Q gi|254780270|r 612 GIVTGLAWTEVGGEILTVEGVIMPGKGEITITGNLKEIMKESILAASSYVRSKATTFGIIPSAFNEINIHVHVPEGATPK 691 (820)
Q Consensus 612 G~v~GLa~t~~GG~~l~IE~~~~~g~g~l~lTG~lg~vmkES~~~A~s~~k~~~~~~~~~~~~~~~~diHih~p~Ga~pK 691 (820)
T Consensus 4 a~v~s~al~Gi~~~~V~VEv~i~~GlP~f~iVGLpd~av~Esr----eRVrsAl~nsg~~---~P~~rItVNLaPAdl~K 76 (506)
T PRK09862 4 SIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEAR----DRVRSAIINSGYE---YPAKKITINLAPADLPK 76 (506)
T ss_pred EEEEEEEEECCEEEEEEEEEEECCCCCCEEEECCCHHHHHHHH----HHHHHHHHHCCCC---CCCCCEEEECCCCCCCC
T ss_conf 5676642307501699999982599862278378469999999----9999999838999---99880899707878888
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCC--CCCEEEEEEEECCEEEEECCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCHHHHC
Q ss_conf 88730689999999998368887--5610663685030250006568999999970996998036775507761488770
Q gi|254780270|r 692 DGPSAGIAMATAIVSIMTCIPVY--KNVAMTGELTLRGRVLPIGGLKEKLLAALRAGVTKVLIPEENIKDLMDIPENVKN 769 (820)
Q Consensus 692 DGPSAGi~i~tal~S~~~~~~v~--~~iAmTGEitl~G~VlpiGGi~eK~laA~raGi~~viiP~~N~~d~~~ip~~~~~ 769 (820)
T Consensus 77 ~Gs~fDLpIA~~iL~a~~qi~~~~l~~~~~~GEL~LdG~lr~v~G~lp~~l~a~~~g-~~~ivp~~n~~ea~~v-----~ 150 (506)
T PRK09862 77 EGGRYDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVPGAISSATEAIKSG-RKIIVAKDNEDEVGLI-----N 150 (506)
T ss_pred CCCCCHHHHHHHHHHHCCCCCHHHHCCEEEEEECCCCCEEECCCCHHHHHHHHHHCC-CEEEECCCCHHHHCCC-----C
T ss_conf 876431999999999769998244302488851255860430653689999999759-9899534645665056-----9
Q ss_pred CCEEEECCCHHHHHHHH
Q ss_conf 97999819399988876
Q gi|254780270|r 770 GLEIIPVSFMGEVLKHA 786 (820)
Q Consensus 770 ~l~~~~v~~~~evl~~a 786 (820)
T Consensus 151 ~~~v~~~~~L~e~~~~l 167 (506)
T PRK09862 151 GEGCLIADHLQAVCAFL 167 (506)
T ss_pred CCCEECCCCHHHHHHHH
T ss_conf 98287032599999986